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...Dr. Zs Math151 Handout #3.10 [Related Rates] By Doron Zeilberger Problem Type 3.10.1 : If F (x, y) = c and dy/dt = a, nd dx/dt when y = b. Example Problem 3.10.1: If x3 + y 3 = 9 and dy/dt = 6 nd dx/dt when y = 2. Steps 1. Find the corresponding valu...
...Dr. Zs Math151 Handout #3.7 [Higher Derivatives] By Doron Zeilberger Problem Type 3.7.1 : Find the rst and second derivatives of the function f (x) = Expression(x). Example Problem 3.7.1: Find the rst and second derivatives of the function f (x) = ta...
...Dr. Zs Math251 Handout #16.9 [The Divergence Theorem] By Doron Zeilberger Problem Type 16.9a: Use the Divergence Theorem to calculate the surface integral where F(x, y, z) = P (x, y, z) i + Q(x, y, z) j + R(x, y, z)k ,
S
F d S,
where S is a surfac...
...Dr. Zs Math151 Handout #2.8 [Derivatives] By Doron Zeilberger Problem Type 2.8.1 : Find f (a) if f (variable) = Expression(variable). Example Problem 2.8.1: Find f (a) if f (s) = s+3 2s + 1
Steps 1. This is exactly like Problem 4.1 (section 2.7), bu...
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File References system a survey of backup techniques, Ann Chervenak, et.al. Physical vs logical backup, Hutchinson, OSDI 99 File System Design for an NFS File Server Appliance TR3002 by Dave Hitz, James Lau, & Michael Malcolm, Network Appliance, Inc. backup services Badri Nath Rutgers University badri@cs.rutgers.edu Protecting file syste ms: a survey of backup techniques. WAFL Physical vs logical backup Data backup Size of files increasing Devices on which files are stored becoming heterogeneous Contact data, images audio Data backup is a huge problem Legal and regulations force data to be stored, multiple versions Backup device is tape or disk Disk as backup is device is gaining ground Backup techniques Full vs incremental backup Full backup Copy entire FS to a backup device Easy restore Costly in terms of space and time Incremental backup Copy only changes since last backup Perform occasional full backups Reduce size of backups Restore may have to follow a chain on incremental backups 1 Backup techniques File-based vs device-based File-based Understand file-structure Read entire files and write to backup device (contiguously) Backup operations use random seeks Restore is easy Any changes to file require entire file to be backed up Unix tar program Unix backup Utilities Tar, cpio, dump and restore Manual, scripts Files, types of files Failures during backup Consistency Device-based Backup blocks, faster writes Need file to block mapping structure Not easily portable Restore will need random seeks Unix dump program Backup techniques Off-line vs on-line backup Off-line backup; system in quiescent state No consistency problems System unavailable during backup snapshot Snapshot : create a atomic read-only copy Any modified blocks accessed via new version Use copy-on-write technique Contents of the snapshot can be copied to a back up device An incremental or full backups of the snapshots can be implemented Popularized by netapp filers On-line backup Backup during system operation Consistency problems Movement of directories may not back up files Need to scan the directory structure (atomic operation) and then backup Snapshot techniques 2 Snapshots Make a copy of root-inode Current FS accessible via new rooti-node Snapshot pointed to by old root i-node Use copy-on-write technique Modified blocks accessible only through the new i-node WAFL WAFL (write-anywhere file system) Has snapshot facility Similar to unix file system File metadata in i-nodes i-nodes point to blocks that are files or directories Inodes also considered as files Can write anywhere WAFL Snapshots WAFL creates and deletes snapshots automatically at preset times Up to 255 snapshots stored at once Uses Copy-on-write to avoid duplicating blocks Snapshot allows Users to recover accidentally deleted files admins Sys to create backups from running system System can restart quickly after unclean shutdown Roll back to previous snapshot WAFL: Metadata as files Fixed location Everything else: write anywhere. i-nodes of the file system User data Bit maps 3 WAFL: detailed view When disk block modified, must modify indirect pointers as well Snapshot details Batch, to improve I/O performance Batched writes Every modified block (and its parents) cannot be written immediately Batched write operations What happens during a crash in between snapshots? Define consistency points and use NVRAM WAFL Consistency Points WAFL uses Snapshots internally so that it can restart quickly even after an unclean system shutdown. A consistency point is a completely self-consistent image of the entire file system. When WAFL restarts, it simply reverts to the most recent consistency point. Buffer dirty data in memory (delayed writes) and write new consistency points as an atomic batch (force). A consistency point transitions the FS from one selfconsistent state to another. Combine with FS operation log in NVRAM 4 What Has Changed? Given a snapshot X, WAFL can ask: is block B allocated in snapshot X? Given a snapshot X and a later snapshot Y, WAFL can ask: what blocks of Y should be sent to the mirror? X 0 0 1 1 Y 0 1 0 Free/unused New block send to mirror Deleted block Un modified block The Block-Map File Typical FS uses bit for each free block, 1 is allocated and 0 is free Ineffective for WAFL since may be other snapshots that point to block WAFL uses 32 bits for each block 1 User Access to Snapshots Example, suppose accidentally removed file named 553.hw1 : Snapshot directories lists the snapshot taken Use that snapshot to restore the lost file No more my disk ate my homework excuse Ls .snapshot/553.hw1 .snapshot/today/.. .snapshot/yesterday/553.hw1 .snpashot/feb26/553.hw1 Performance recover most recent version: cp .snapshot/yesterday/553.hw1 553.hw1 Note, snapshot directories (.snapshot) are hidden in that they don t show up with ls 5 SnapMirror Can use this mechanism to mirror data across WAN Can reduce data storage requirements by not backing up deleted/updated data Identifying dirty blocks are easier than logical, file system aware mechanisms WAFS WAFL Conclusions WAFL WAFL s consistency points allow it to buffer writes and push them out in a batch Copy-on-write technique allows on-line backup Write performance optimized Deferred, clustered allocation Batch writes Localize writes Challenges Snap mirror over WAN Expensive (network bandwidth requirements) Performance slow because transaction cannot complete till WAN update finishes Multiple device backups 2 B cell phones Each has 1 M of data (pictures + contact data) How to design backup service? 6
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Rutgers >> 198 >> 352 (Summer, 2008)
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Rutgers >> 206 >> 352 (Spring, 2008)
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Rutgers >> 198 >> 352 (Summer, 2008)
Impact of Conguration Errors on DNS Robustness Vasileios Pappas UCLA Computer Science vpappas@cs.ucla.edu Zhiguo Xu UCLA Computer Science zhiguo@cs.ucla.edu Songwu Lu UCLA Computer Science slu@cs.ucla.edu Daniel Massey Colorado State University ma...
Rutgers >> 206 >> 352 (Spring, 2008)
Impact of Conguration Errors on DNS Robustness Vasileios Pappas UCLA Computer Science vpappas@cs.ucla.edu Zhiguo Xu UCLA Computer Science zhiguo@cs.ucla.edu Songwu Lu UCLA Computer Science slu@cs.ucla.edu Daniel Massey Colorado State University ma...
Rutgers >> 198 >> 352 (Summer, 2008)
Recovering Internet Service Sessions from Operating System Failures Florin Sultan , Aniruddha Bohra , Pascal Gallard , Iulian Neamtiu , Stephen Smaldone , Yufei Pan , and Liviu Iftode Department of Computer Science Rutgers University, Piscataway, NJ...
Rutgers >> 206 >> 352 (Spring, 2008)
Recovering Internet Service Sessions from Operating System Failures Florin Sultan , Aniruddha Bohra , Pascal Gallard , Iulian Neamtiu , Stephen Smaldone , Yufei Pan , and Liviu Iftode Department of Computer Science Rutgers University, Piscataway, NJ...
Rutgers >> 198 >> 352 (Summer, 2008)
Computer Communications 27 (2004) 935945 www.elsevier.com/locate/comcom The distinctive design characteristic of a wireless sensor network: the energy map Raquel A.F. Minia,*, Antonio A.F. Loureiroa, Badri Nathb a Department of Computer Science, Fe...
Rutgers >> 206 >> 352 (Spring, 2008)
Computer Communications 27 (2004) 935945 www.elsevier.com/locate/comcom The distinctive design characteristic of a wireless sensor network: the energy map Raquel A.F. Minia,*, Antonio A.F. Loureiroa, Badri Nathb a Department of Computer Science, Fe...
Rutgers >> 198 >> 352 (Summer, 2008)
Network Security Why Network Security? Malicious people share your network People who want to snoop People who want to destroy People who want to corrupt People who want to pretend People who want to steal Problem made more severe as Internet becom...
Rutgers >> 206 >> 352 (Spring, 2008)
Network Security Why Network Security? Malicious people share your network People who want to snoop People who want to destroy People who want to corrupt People who want to pretend People who want to steal Problem made more severe as Internet becom...
Rutgers >> 198 >> 352 (Summer, 2008)
network services Badri Nath Rutgers University badri@cs.rutgers.edu References: ANDERSEN, D. G., BALAKRISHNAN, H., KAASHOEK, M. F., AND MORRIS, R. Resilient Overlay Networks. In Proc. 18th ACM SOSP (Banff, Canada, Oct. 2001), pp. 131145 Ratul Mahaj...
Rutgers >> 206 >> 352 (Spring, 2008)
network services Badri Nath Rutgers University badri@cs.rutgers.edu References: ANDERSEN, D. G., BALAKRISHNAN, H., KAASHOEK, M. F., AND MORRIS, R. Resilient Overlay Networks. In Proc. 18th ACM SOSP (Banff, Canada, Oct. 2001), pp. 131145 Ratul Mahaj...
Rutgers >> 198 >> 352 (Summer, 2008)
Multimedia networking (chapter 7) New applications on the net Real-time applications Video, audio, streaming applications Delay-sensitive Loss-tolerant Voice over IP Interactive voice Voice over data networks Multimedia Protocols RTP, RTCP - time s...
Rutgers >> 206 >> 352 (Spring, 2008)
Multimedia networking (chapter 7) New applications on the net Real-time applications Video, audio, streaming applications Delay-sensitive Loss-tolerant Voice over IP Interactive voice Voice over data networks Multimedia Protocols RTP, RTCP - time s...
Rutgers >> 198 >> 352 (Summer, 2008)
CS 352 Internet Technology Badri Nath http:/www.cs.rutgers.edu/~badri/352.html Dept. of Computer Science Rutgers University What is a Network? Carrier of information between 2 or more entities Interconnection may be any medium capable of communic...
Rutgers >> 206 >> 352 (Spring, 2008)
CS 352 Internet Technology Badri Nath http:/www.cs.rutgers.edu/~badri/352.html Dept. of Computer Science Rutgers University What is a Network? Carrier of information between 2 or more entities Interconnection may be any medium capable of communic...
Rutgers >> 198 >> 352 (Summer, 2008)
Trajectory Based Forwarding and Its Applications Dragos Niculescu and Badri Nath Rutgers University DATAMAN Lab {dnicules,badri}@cs.rutgers.edu ABSTRACT Trajectory based forwarding (TBF) is a novel method to forward packets in a dense ad hoc networ...
Rutgers >> 206 >> 352 (Spring, 2008)
Trajectory Based Forwarding and Its Applications Dragos Niculescu and Badri Nath Rutgers University DATAMAN Lab {dnicules,badri}@cs.rutgers.edu ABSTRACT Trajectory based forwarding (TBF) is a novel method to forward packets in a dense ad hoc networ...
Rutgers >> 198 >> 352 (Summer, 2008)
Ad-hoc networks (I) Ad-hoc networking Routing protocols Proactive protocols DSDV, AODV Reactive protocols DSR Hybrid protocols ZRP Location aided Routing LAR Infrastructure based networks Fixed access points connected to a backbone network Mobile...
Rutgers >> 206 >> 352 (Spring, 2008)
Ad-hoc networks (I) Ad-hoc networking Routing protocols Proactive protocols DSDV, AODV Reactive protocols DSR Hybrid protocols ZRP Location aided Routing LAR Infrastructure based networks Fixed access points connected to a backbone network Mobile...
Rutgers >> 198 >> 352 (Summer, 2008)
Robust Statistical Methods for Securing Wireless Localization in Sensor Networks Zang Li, Wade Trappe, Yanyong Zhang, Badri Nath Abstract Many sensor applications are being developed that require the location of wireless devices, and localization sch...
Rutgers >> 206 >> 352 (Spring, 2008)
Robust Statistical Methods for Securing Wireless Localization in Sensor Networks Zang Li, Wade Trappe, Yanyong Zhang, Badri Nath Abstract Many sensor applications are being developed that require the location of wireless devices, and localization sch...
Rutgers >> 198 >> 352 (Summer, 2008)
Self-Tuning Wireless Network Power Management Manish Anand, Edmund B. Nightingale, and Jason Flinn Department of Electrical Engineering and Computer Science University of Michigan ABSTRACT Current wireless network power management often substantiall...
Rutgers >> 206 >> 352 (Spring, 2008)
Self-Tuning Wireless Network Power Management Manish Anand, Edmund B. Nightingale, and Jason Flinn Department of Electrical Engineering and Computer Science University of Michigan ABSTRACT Current wireless network power management often substantiall...
Rutgers >> 198 >> 352 (Summer, 2008)
What is a network service? A generalization of the client server model Communication takes place over a network Even if it is local! e.g. local security services for login The service is provided by a set of processes running on a server Wide Ar...
Rutgers >> 206 >> 352 (Spring, 2008)
What is a network service? A generalization of the client server model Communication takes place over a network Even if it is local! e.g. local security services for login The service is provided by a set of processes running on a server Wide Ar...
Rutgers >> 198 >> 352 (Summer, 2008)
Tandem TR 85.7 WHY DO COMPUTERS STOP AND WHAT CAN BE DONE ABOUT IT? Jim Gray June, 1985 Revised November, 1985 ABSTRACT An analysis of the failure statistics of a commercially available fault-tolerant system shows that administration and software a...
Rutgers >> 206 >> 352 (Spring, 2008)
Tandem TR 85.7 WHY DO COMPUTERS STOP AND WHAT CAN BE DONE ABOUT IT? Jim Gray June, 1985 Revised November, 1985 ABSTRACT An analysis of the failure statistics of a commercially available fault-tolerant system shows that administration and software a...
Rutgers >> 198 >> 352 (Summer, 2008)
Authenticationand keyexchangeprotocols Lecture8CS442Spring2008 VinodGanapathy Lecturenotesbasedupon: Chapter9inyourtextbook Kerberospaper Planfortoday AuthenticationusingKerberos PKI Publickeycertificates Managingkeys Revokingkeys X509 PGP ...
Rutgers >> 198 >> 442 (Fall, 2008)
How to Read a Paper S. Keshav David R. Cheriton School of Computer Science, University of Waterloo Waterloo, ON, Canada keshav@uwaterloo.ca ABSTRACT Researchers spend a great deal of time reading research papers. However, this skill is rarely taugh...
Rutgers >> 198 >> 443 (Spring, 2008)
Fundamentals of Multimedia, Chapter 6 Chapter 6 Basics of Digital Audio 6.1 Digitization of Sound 6.2 MIDI: Musical Instrument Digital Interface 6.3 Quantization and Transmission of Audio 6.4 Further Exploration 1 Li & Drew c Prentice Hall 2003 ...
Rutgers >> 198 >> 509 (Fall, 2008)
198:538 Complexity of Computation Rutgers University, Spring 2007 Homework 4 Solutions Problem 1 Our instance checker I rst runs the candidate algorithm M on the input matrices A and B to receive some matrix C as an answer. To check that indeed AB ...
Rutgers >> 198 >> 538 (Fall, 2008)
198:538 Complexity of Computation Rutgers University, Spring 2007 Homework 4 Solutions Problem 1 Our instance checker I rst runs the candidate algorithm M on the input matrices A and B to receive some matrix C as an answer. To check that indeed AB ...
Rutgers >> 198 >> 516 (Fall, 2008)
Machine Independent Compiler Optimization -2 Building and optimizing basic blocks Recovering code from expression DAGs Control ow graph Reducibility properties Worklist iterative algorithm for dataow analysis Versions of the algorithm Worklis...
Rutgers >> 198 >> 516 (Fall, 2008)
Dataow Analysis Lattice theoretic foundations Partial ordering Meet, Join, Lattice, Chain Round robin xed point iteration Function properties Monotonicity Distributivity Justication for using xed-point iteration on dataow equations Meet Ov...
Rutgers >> 198 >> 516 (Fall, 2008)
Optimizing Compilers IR j E opt1 d d d d E c E optn E IR error file Many compilers include an optimizer often structured as a series of passes tries to improve code quality may repeat transformations several times 198:515 Fall...
Rutgers >> 198 >> 516 (Fall, 2008)
Bottom-up parsers start at the leaves and ll in construct rightmost derivation in reverse nd the next right-hand side of a production (handle) such that its replacement by left-hand side nonterminal will yield previous right-sentential form as in...
Rutgers >> 198 >> 516 (Fall, 2008)
Course Road Map for Remainder of Semester Homework set #5 will be posted by tomorrow. Exams will be returned on Tuesday, November 6. Final exam Friday, December 14? Does this work for everyone. Cannot say anything about the time/location yet, so n...
Rutgers >> 198 >> 516 (Fall, 2008)
CS 515 Programming Languages and Compilers I Problem Set 1 Sample solution will be posted Thursday, September 20 Problem 1 Predictive Parsing Assume the following CFG for prex expressions. Token INTCONST represents an integer constant. Start := Exp...
Rutgers >> 198 >> 516 (Fall, 2008)
Unication occurs check The occurs check is necessary to prevent the unication of terms such as s(X) and X. There is no nite common instance of these terms. Example: What if we ignore occurs check? append([ ], Y, Y]. append([H | T], Y, [H | Z]) :- ap...
Rutgers >> 198 >> 516 (Fall, 2008)
Local vs. Global Optimization Scope local within basic block global across basic blocks inter-procedural whole program optimization across procedure boundaries refers to both analyses and optimizations Some optimizations may be applied locally...
Rutgers >> 198 >> 519 (Fall, 2008)
[Recreated electronic version by Eric A. Brewer (brewer@cs.berkeley.edu), Oct 20, 1998] Scheduler Activations: Effective Kernel Support for the User-Level Management of Parallelism THOMAS E. ANDERSON, BRIAN N. BERSHAD, EDWARD D. LAZOWSKA, and HENRY ...
Rutgers >> 198 >> 534 (Fall, 2008)
CS 534 Spring 2005: A. Elgammal Rutgers University CS 534: Computer Vision Segmentation II Graph Cuts and Image Segmentation Spring 2005 Ahmed Elgammal Dept of Computer Science Rutgers University CS 534 Segmentation II - 1 Outlines What is G...
Rutgers >> 198 >> 536 (Fall, 2008)
CS536 Machine Learning Spring 2007 Assignment 1 Due Date March 7th 2007 Submission instruction: submit your work in the TA\'s mailbox. Any questions related to Weka should be directed to the TA. [Q1 10 points] Consider the following set of training e...
Rutgers >> 694 >> 483 (Fall, 2008)
Old Gabriel Exam, Answers 1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 26. C B E C E A C E D E B B A 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. 24. 25. D C A B C B B D C B E B A-1 fragment, 12 kb B-3 fragments, 1 kb, 7 kb, 4 kb C-3 fragments, 4.5 kb, 1.5...
Rutgers >> 694 >> 483 (Fall, 2008)
MBB 408/512 Lecture 5 Eukaryotic DNA Replication (Part II) Packaging of Eukaryotic DNA A Packaging Problem In the human genome, there are 3 X 109 bp distributed among 23 pairs of chromosomes. There are 3.4 / bp in B-DNA The total length of the DNA i...
Rutgers >> 694 >> 483 (Fall, 2008)
Table 2-1. Key definitions Term (DNA Repair and Mutagenesis, Friedberg et al) Definition Mutation A heritable change in the sequence of an organisms genome Mutant An organism that carries one or more mutations in its genome Genotype Phenotype M...
Rutgers >> 694 >> 483 (Fall, 2008)
215 Midterm exam (Oct 24, 2006) NAME:_Group:_ NOTE: There are 12 questions in total (9 pages total) 1. (6 points) A scientist working at Merck is doing some minipreps and runs out of Buffer P2. Buffer 2 is 0.2 N NaOH and 1% SDS. It turns out that the...
Rutgers >> 694 >> 483 (Fall, 2008)
IMBBR 315 Quiz # 2 (Jan. 30, 2007)each question is worth 5 points. Name_ Lab (day)_ 1. (5 points) A student wants to make 500 ml of 50 mM MgCl2. She has a stock solution of 1M MgCl2. How much of each of the following does she need to add to make the ...
Rutgers >> 694 >> 483 (Fall, 2008)
MBB 694:408/512 Spring Gunderson Lectures Handout #4 pages 51-62 (6 pages Text + Figures 24-29) For handouts 1-4 you can use Lodish 4th edition chapter 11 as a reference. Access Lodish Textbook via http:/www.ncbi.nlm.nih.gov/books (search for \"Lod...
Rutgers >> 694 >> 483 (Fall, 2008)
IMBBR 315 Quiz #2 January 31, 2006 Name_ Lab Section (day)_ 1. (3 points) What is the main experiment you will perform in lab this week? We will be doing minipreps to make DNA from the colonies we picked last week. 2. (3 points) Briefly explain wh...
Rutgers >> 694 >> 483 (Fall, 2008)
Molecular Biology and Biochemistry 694:408/115:512 Dr. Andrew Vershon, Waksman Institute, Room 233 445-2905 vershon@waksman.rutgers.edu Office Hours: by appointment, or drop by PROKARYOTIC TRANSCRIPTION Handouts with the figures can be downloaded fr...
Rutgers >> 694 >> 483 (Fall, 2008)
IMBBR Final Exam (May 1, 2006) NAME:_ SECTION:_ NOTE: There are 18 questions in total (13 pages total) <PLEASE WRITE YOUR NAME ON EACH PAGE> 1. A student discovers a new gene in C. remanei that is required for fertility. The structure of the gene i...
Rutgers >> 694 >> 483 (Fall, 2008)
Cell, Vol. 108, 453463, February 22, 2002, Copyright 2002 by Cell Press The RNA Polymerase II Machinery: Structure Illuminates Function Nancy A. Woychik1 and Michael Hampsey 2,3 Department of Molecular Genetics and Microbiology 2 Department of Bioch...
Rutgers >> 694 >> 483 (Fall, 2008)
IMBBR 315 Quiz # 4 (Feb. 22, 2005) Name_ Lab (day)_ (There are 6 questions in total) 1. (3 points) What are the three experiments that you will perform in lab this week (lab 6)? (a) _DNA Sequencing_ (b) _Plasmid DNA Minipreps_ (c) _PCR_ 2. (4 points)...
Rutgers >> 694 >> 483 (Fall, 2008)
Molecular Biology and Biochemistry 694:408/115:512 Spring 2008 Dr. Andrew Vershon, Waksman Institute, Room 233 445-2905 vershon@waksman.rutgers.edu EUKARYOTIC TRANSCRIPTION #1 Watson et al. Molecular Biology of the Gene (2004) Ch 7 (p151-180), Ch 12...
Rutgers >> 694 >> 483 (Fall, 2008)
Quiz 5. 3/1/05 Name _ Lab Section _ 1) You send a sequencing reaction and get the following sequence back: 1 10 20 30 40 50 | | | | | | AATCGGCTTAAAAAAAAAAAATCCGCTCGAAATTTCTAAGCTTCGAGAGG 51 60 70 80 90 100 | | | | | | CCTCTAGGAAATTNCCGCCTANAGAGTCTT...
Rutgers >> 694 >> 483 (Fall, 2008)
Multiple choice Questions (2 points each): 1. What is the source of the repair template during excision repair? a. There is none, since repair is by direct reversal. b. There is none, since repair is bypassed. c. The strand complementary to the damag...
Rutgers >> 694 >> 483 (Fall, 2008)
Syllabus Spring 2008 01:694:484 Seminar in Molecular Biology and Biochemistry Dr. Sam Gunderson is course coordinator and will be assembling the list of outside guest speakers. Dr. Niederman and Dr. Grant will be teaching each section. Dr. Barth Gran...
Rutgers >> 694 >> 483 (Fall, 2008)
Lab 1 Pipeting and dilutions Lab 1 I. Pipet bulbs: Each group will be given a black rubber bulb siphon to pipet liquids. These tools for measuring liquids from 1 to 25 ml are used in conjunction with pipets. The pipets used in the laboratory are st...
Rutgers >> 694 >> 483 (Fall, 2008)
Name_Group _ Introduction to Research (215) Midterm 2008 NOTE: There are 13 questions in total (9 pages total) 1. (6 points total) (Avg 4.0 SD 2.0). You do a plasmid prep, producing 500 l of plasmid DNA, and you want to know its concentration. You p...
Rutgers >> 694 >> 483 (Fall, 2008)
1 Meiosis and Recombination 2 Meiotic recombination and crossing-over 3 Relationship between recombination frequency and physical distance 4 Figure 8-18. Recombination during meiosis. (a) Crossing over occurs between chromatids of homologous c...
Rutgers >> 694 >> 483 (Fall, 2008)
Intro to Research 215 Quiz 1 20 points total 9/11/07 Name_ Group #_ 1. (2 points) Fill in the DNA complement of this strand. Indicate both the 5\' and 3\' ends of the new strand. 5-A T T C G C A C T G-3\' 3-T A A G C G T G A C-5\' 4. (6 points) DNA ...
Rutgers >> 694 >> 484 (Spring, 2008)
215 Chapter 0 - Introduction Honors Introduction to Molecular Biology and Biochemistry Research (694:215) Lecture Manual, Fall 2008 Lecture: Laboratory: Course Instructor: Dr. Andrew Vershon Lab Coordinator: Dr. Marty Nemeroff Teaching Assistant: Wi...
Rutgers >> 694 >> 484 (Spring, 2008)
MBB 694:408 Lecture 8 (2/18/08) Dr. Abram Gabriel CABM 306 235-5097 DNA Mutability I. DNA is the repository of genetic information for the cell and for the species. Mutations are a double edged sword; while they may be evolutionarily advantageous for...
Rutgers >> 694 >> 484 (Spring, 2008)
694-215 Quiz 2 Vectors & Minipreps Name: _ Group _ 1. (4 points) What are vectors used for? A vector is a DNA molecule, such as a plasmid or virus genome, that can replicate in a host organism. DNA fragments of interest can be inserted (cloned) into...
Rutgers >> 694 >> 484 (Spring, 2008)
MBB 408/512 Lecture 5 Eukaryotic DNA Replication (Part II) Packaging of Eukaryotic DNA A Packaging Problem In the human genome, there are 3 X 109 bp distributed among 23 pairs of chromosomes. There are 3.4 / bp in B-DNA The total length of the DNA i...
Rutgers >> 694 >> 484 (Spring, 2008)
Ch10: Literature Analysis p. 10-1 p. 10-2 p. 10-2 p. 10-2 Wikipedia - p. 10-3 p. 10-3 p. 10-4 p. 10-4 p. 10-5 p. 10-6 p. 10-7 p. 10-8 p. 10-8 p. 10-9 ...
Rutgers >> 694 >> 484 (Spring, 2008)
Table 2-1. Key definitions Term (DNA Repair and Mutagenesis, Friedberg et al) Definition Mutation A heritable change in the sequence of an organisms genome Mutant An organism that carries one or more mutations in its genome Genotype Phenotype M...
Rutgers >> 694 >> 484 (Spring, 2008)
F44E5.4 (Heat Shock Protein 70) IMBBR 315 Christopher Ricupero Clones 58.3% of colonies picked vs. successful clones sequenced Clone # Gene Name P(N) 14D6-53 F31C3.9 14D6-54 F31C3.9 14D6-55 F31C3.9 14D6-57 F44E5.4 14D6-59 F54E4.1 14D6-60 W01C...
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