Course Hero has millions of student submitted documents similar to the one
below including study guides, practice problems, reference materials, practice exams, textbook help and tutor support.
Find millions of documents on Course Hero - Study Guides, Lecture Notes, Reference Materials, Practice Exams and more.
Course Hero has millions of course specific materials providing students with the best way to expand
their education.
Below is a small sample set of documents:
USC - EE - 549
UNIVERSITY OF SOUTHERN CALIFORNIA, SPRING 20091EE549: Problem Set #1 Due Wednesday, Jan. 21, 2009Note: For design-your-own-problem assignments, your stated problem and solution should be as complete, clear, and detailed as the example problems/s
USC - MARSHALL - 005
USC Marshall School of BusinessAcademic Information ServicesSponsoring a Guest on USCs Wireless Network- Windows XP LaptopsThis handout covers how a USC guest with a wireless laptop can be easily setup to use USCs wireless network. To allow gue
USC - TERM - 20073
Final Examination Schedule WorksheetAvoid final examination scheduling problems. Mark the full examination time/day for each of your classes in the chart below. If the sequence and spacing are not satisfactory, reconsider the meeting times of altern
USC - CS - 596
Master of Science in Computer Science with Specialization in High Performance Computing & Simulations (MSCS-HPCS) Deficiency Courses: EE457Lx Computer Systems Organization CS402 Operating Systems CS410 Translation of Programming Languages Course Requ
USC - CS - 596
Parallel Lattice Boltzmann Flow Simulation on Emerging Multi-core PlatformsLiu Peng, Ken-ichi Nomura, Takehiro Oyakawa, Rajiv K. Kalia, Aiichiro Nakano, and Priya VashishtaCollaboratory for Advanced Computing and Simulations, Department of Computer
USC - CS - 596
IOP PUBLISHING J. Phys.: Condens. Matter 20 (2008) 294204 (9pp)JOURNAL OF PHYSICS: CONDENSED MATTER doi:10.1088/0953-8984/20/29/294204Metascalable molecular dynamics simulation of nano-mechano-chemistryF Shimojo1,2, R K Kalia1 , A Nakano1 , K No
USC - CS - 596
DE NOVO ULTRASCALE ATOMISTIC SIMULATIONS ON HIGH-END PARALLEL SUPERCOMPUTERSAiichiro Nakano Rajiv K. Kalia1 Ken-ichi Nomura1 Ashish Sharma1, 2 Priya Vashishta1 Fuyuki Shimojo1,3 4 Adri C. T. van Duin 4 William A. Goddard, III 5 Rupak Biswas Deepak S
USC - CS - 596
the video novice to convey the message effectively, making good use of annotation and motion. For greatest effectiveness, scientists really need to incorporate the type of design expertise found in film and television studios. They also need better t
USC - CS - 596
Glyphmaker: Creating Customized Visualizations of Complex DataWilliam Ribarsky, Eric Ayers, John Eble, and Sougata Mukherjea Georgia Institute of TechnologyGlyphmaker's general approach to data visualization and analysis lets users build customize
USC - CS - 596
84Computer Physics Communications 63 (1991) 8494 North-HollandVisualizing quantum scattering on the CM-2 supercomputerJohn L. Richardson1Received 2 February 1990 Thinking Machines Corporation, 245 First Street, Cambridge, MA 02142-1214, USAWe
USC - CS - 596
Distinguished Lecturer SeriesFriday, November 7, 2008Dr. David PattersonProfessor, UC BerkeleyThe Parallel Revolution has Started: Are You Part of the Solution or Part of the Problem?Salvatori Auditorium (SAL 101)Lecture 3:30 PM Reception 4:
USC - CS - 596
The Landscape of Parallel Computing Research: A View from Berkeley 2.0Krste Asanovic, Ras Bodik, Jim Demmel, John Kubiatowicz, Kurt Keutzer, Edward Lee, George Necula, Dave Patterson, Koushik Sen, John Shalf, John Wawrzynek, and Kathy YelickJune, 2
USC - CS - 596
IntroductionComputer Experiment Computational science: An area of scientific investigation, where computers play a central role. Scientific computing: An area in computer science to support computational sciences by innovative use of computer syst
USC - CS - 596
Molecular Dynamics BasicsBasics of the molecular-dynamics (MD) method1-3 are described, along with corresponding data structures in program, md.c.Newtons Second Law of MotionTRAJECTORY, COORDINATE, AND ACCELERATION Physical system = a set of ato
USC - CS - 596
Linked-List Cell Molecular DynamicsThis chapter explains the linked-list cell MD algorithm, the computational time of which scales as O(N) for N atoms. We will replace function computeAccel() in the O(N2) program md.c by this algorithm. Recall that
USC - CS - 596
Message Passing Interface (MPI) ProgrammingMPI (Message Passing Interface) is a standard message passing system that enables us to write and run applications on parallel computers. In 1992, MPI Forum was formed to develop a portable message passing
USC - CS - 596
Message Passing Interface (MPI) Programming Aiichiro NakanoCollaboratory for Advanced Computing & Simulations Department of Computer Science Department of Physics & Astronomy Department of Chemical Engineering & Materials Science University of Sout
USC - CS - 596
Calculating in Parallel Using MPI Aiichiro NakanoCollaboratory for Advanced Computing & Simulations Department of Computer Science Department of Physics & Astronomy Department of Chemical Engineering & Materials Science University of Southern Cali
USC - CS - 596
Parallel Molecular DynamicsThis chapter explains the example parallel MD program, pmd.c, in detail.Spatial Decomposition Spatial decomposition: The physical system to be simulated is partitioned into subsystems of equal volume. Processors in a pa
USC - CS - 596
Visualizing Molecular Dynamics IWindowingGraphic LibraryOpenGL OpenGL: A standard, hardware-independent interface to graphics hardware (e.g., SGI InfiniteReality2 Graphics Engine). A set of graphics routines defined on the OpenGL virtual graphics
USC - CS - 596
Quantum Dynamics BasicsIn this chapter, we will simulate the dynamics of a particle, such as an electron, which follows the law of quantum mechanics [1]. Basics of the quantum-dynamics (QD) method [2-5] are described, along with corresponding data s
USC - CS - 596
Parallel Quantum Dynamics Aiichiro NakanoCollaboratory for Advanced Computing & Simulations Department of Computer Science Department of Physics & Astronomy Department of Chemical Engineering & Materials Science University of Southern California Em
USC - CS - 596
Hybrid MPI+OpenMP Parallel MD Aiichiro NakanoCollaboratory for Advanced Computing & Simulations Department of Computer Science Department of Physics & Astronomy Department of Chemical Engineering & Materials Science University of Southern Californi
USC - CS - 596
Optimizing Molecular Dynamics Aiichiro NakanoCollaboratory for Advanced Computing & Simulations Department of Computer Science Department of Physics & Astronomy Department of Chemical Engineering & Materials Science University of Southern Californi
USC - CS - 596
Advanced Topics in Parallel Molecular Dynamics Aiichiro NakanoCollaboratory for Advanced Computing & Simulations Department of Computer Science Department of Physics & Astronomy Department of Chemical Engineering & Materials Science University of S
USC - CS - 596
Divide-&-Conquer Parallelism Aiichiro NakanoCollaboratory for Advanced Computing & Simulations Department of Computer Science Department of Physics & Astronomy Department of Chemical Engineering & Materials Science University of Southern California
USC - CS - 596
CSCI596: Scientic Computing & VisualizationSummaryAiichiro NakanoCollaboratory for Advanced Computing & Simulations Department of Computer Science Department of Physics & Astronomy Department of Chemical Engineering & Materials Science University o
USC - CS - 596
Least Square Fit of a LineProblem: Given a set of N pairs of numbers, {(xi, yi) | i = 1, ., N}, what is the best linear fit, y = ax + b,Nin the sense that it minimizes the square error, S = # ( axi + b " yi ) .i=12Answer: S is a quadratic fu
USC - CS - 596
How to Install OpenGLWINDOWSInstall your favorite integrated development environment (IDE). This tutorial assumes that you have Microsoft Visual Studio installed on your machine. 1. Install OpenGL OpenGL software runtime is included as part of oper
USC - CS - 596
Scientific Virtual-Reality ApplicationsThis lecture note describes interactive three-dimensional visualization of scientific datasets, using the earliest immersive and interactive visualization platforms, CAVE and ImmersaDesk, and the associated CAV
USC - CS - 596
Massive Dataset VisualizationAiichiro Nakano Collaboratory for Advanced Computing & Simulations Dept. of Computer Science, Dept. of Physics & Astronomy, Dept. of Chemical Engineering & Materials Science University of Southern California Email:
USC - CS - 596
Ashish Sharma sharmaa@usc.edu Collaboratory for Advanced Computing and Simulations Dept. of Computer Science Aiichiro Nakano anakano@usc.edu Dept. of Computer Science Rajiv K. Kalia rkalia@usc.edu Dept. of Physics & Astronomy Priya Vashishta priyav@u
USC - CS - 596
A Spatially Decomposed Parallel Visualization AlgorithmInternational Journal of Computational Science 1992-6669 (Print) 1992-6677 (Online) Global Information Publisher 2007, Vol. 1, No. 4, 407-421ParaViz: A Spatially Decomposed Parallel Visualiza
USC - CS - 653
International Journal of Parallel Programming, Vol. 29, No. 3, 2001Improving Memory Hierarchy Performance for Irregular Applications Using Data and Computation Reorderings 1John Mellor-Crummey, 2, 4 David Whalley, 3 and Ken Kennedy 2Received Octo
USC - CS - 653
124IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING,VOL. 13,NO. 1, JANUARY/FEBRUARY 2001Analysis of the Clustering Properties of the Hilbert Space-Filling CurveBongki Moon, H.V. Jagadish, Christos Faloutsos, Member, IEEE, and Joel H. Salt
USC - CS - 653
Cache-Oblivious AlgorithmsEXTENDED ABSTRACT SUBMITTED FOR PUBLICATION.Matteo Frigo Charles E. Leiserson Harald Prokop Sridhar Ramachandran MIT Laboratory for Computer Science, 545 Technology Square, Cambridge, MA 021393 0 8 ( B8 & 8 3 & 2
USC - CS - 596
CSCI596 (Scientific Computing and Visualization) Assignment 1Molecular Dynamics Due: September 15 (Mon), 2008, at the class The purpose of this assignment is to familiarize yourself with the simple molecular dynamics (MD) program, md.c (and its linke
USC - CS - 596
CSCI596 Assignment 2Message Passing Interface Due: September 24 (Wed), 2008, at the class In this assignment, you will write your own global summation program (equivalent to using MPI_Send and MPI_Recv. Your program should run on P = 2l processors (l
USC - CS - 596
CSCI596 Assignment 3Parallel Computation of Due: October 1 (Wed), 2008 Part I: Programming Write a message passing interface (MPI) program, global_pi.c, to compute the value of based on the lecture note on Parallel Computation of Pi and using the g
USC - CS - 596
CSCI596 Assignment 4Parallel Molecular Dynamics Due: October 8 (Wed), 2008 The purpose of this assignment is to get familiar with the message-passing scheme used in the parallel molecular dynamics (MD) program, pmd.c, and asynchronous messages in the
USC - CS - 596
CSCI596 Assignment 5: Molecular Dynamics Animation Due: October 22 (Wed), 2008 Combine md.c and atomv.c to write a C/OpenGL program that animates molecular dynamics (MD) simulation in real time. (Follow the lecture note on Visualizing Molecular Dynam
USC - CS - 596
CSCI596 Assignment 6: Parallel Quantum Dynamics Due: November 3 (Mon), 2008 (at the class) Parallelize the one-dimensional quantum dynamics (QD) simulation program qd1.c, using MPI. Use spatial decomposition, so that processor p [0, P-1] (P is the n
USC - CS - 596
CSCI596 (Scientific Computing and Visualization) Assignment 7 Hybrid MPI+OpenMP Parallel Molecular Dynamics Due: November 12 (Wed), 2008 (at the class) 1. Write a hybrid MPI+OpenMP parallel molecular dynamics (MD) program (name it hmd.c), starting fr
USC - CS - 596
CSCI596 (Scientific Computing and Visualization) Final Project Anything Related to What You Have Learned in the Class Due: December 17 (Wed), 2008 Submit the following project by Wednesday, December 17. In addition, at 3:30-4:50pm on Wednesday, Decem
USC - CS - 596
Guidelines for the Final Project I. II. Programming Critical review (>2-3 pages) Dont repeat what the paper says. 1. 2. 3. 4. * III. Problem: Whats the problem? Method: How to solve it? Results: Bottom line? So what? Critique: Flaw? Improvement (how
USC - CS - 653
84Computer Physics Communications 63 (1991) 8494 North-HollandVisualizing quantum scattering on the CM-2 supercomputerJohn L. Richardson1Received 2 February 1990 Thinking Machines Corporation, 245 First Street, Cambridge, MA 02142-1214, USAWe
USC - CS - 653
CSCI653: High Performance Computing & SimulationsAiichiro NakanoCollaboratory for Advanced Computing & Simulations Department of Computer Science Department of Physics & Astronomy Department of Chemical Engineering & Materials Science University of
USC - CS - 653
Molecular Dynamics I: PrinciplesBasics of the molecular-dynamics (MD) method1-3 are described, along with corresponding data structures in program, md.c.Newtons Second Law of MotionTRAJECTORY, COORDINATE, AND ACCELERATION Physical system = a set
USC - CS - 653
Minimal Complex Analysis Complex function: A mapping from a complex variable z = x + iy (i = f(z) C."1) to a complex numberDifferentiation: A complex function f(z) at z is differentiable if the quantity ! f (z + "z) # f (z)"zconverges to a
USC - CS - 653
JOURNALOF COMPUTATIONALPHYSICS73, 315-348 (1987)A Fast Algorithmfor ParticleANDSimulations*L. GREENCARDV. ROKHLINDepartment of Computer Science, Yale Lnipersiry, New Haven, Connecticut 06520 Received June 10. 1986; revised February
USC - CS - 653
ELSEYIER2s -/.-I@Computer Physics Communications Computer Physics Communications ( 1997)59-69 104Parallel multilevel preconditioned conjugate-gradient approach to variable-charge molecular dynamicsAiichiro Nakano Depurtment of Computer Scienc
USC - CS - 653
Computer Physics Communications 153 (2003) 445461 www.elsevier.com/locate/cpcScalable and portable implementation of the fast multipole method on parallel computers Shuji Ogata a , Timothy J. Campbell b , Rajiv K. Kalia c,d , Aiichiro Nakano c,d,
USC - CS - 653
Reversiblemultipletime scale moleculardynamicsM. Tuckermar?) G. J. Martynaand B. J. BerneDepartment of Chemistry, Columbia University, New York, New York 10027 Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvani
USC - CS - 653
Computer Physics CommunicationsELSEVIERComputer Physics Communications 83 (1994) 197214Multiresolution molecular dynamics algorithm for realistic materials modeling on parallel computersAiichiro Nakano, Rajiv K. Kalia, Priya VashishtaConcurrent
USC - CS - 653
Message Passing Interface (MPI) ProgrammingMPI (Message Passing Interface) is a standard message passing system that enables us to write and run applications on parallel computers. In 1992, MPI Forum was formed to develop a portable message passing
USC - CS - 653
OpenMP ProgrammingAiichiro NakanoCollaboratory for Advanced Computing & Simulations Department of Computer Science Department of Physics & Astronomy Department of Chemical Engineering & Materials Science University of Southern California Email: ana
USC - CS - 653
Hybrid MPI+OpenMP Parallel MDAiichiro NakanoCollaboratory for Advanced Computing & Simulations Department of Computer Science Department of Physics & Astronomy Department of Chemical Engineering & Materials Science University of Southern California
USC - CS - 653
Parallel Molecular DynamicsThis chapter explains the example parallel MD program, pmd.c, in detail.Spatial Decomposition Spatial decomposition: The physical system to be simulated is partitioned into subsystems of equal volume. Processors in a pa
USC - CS - 653
Parallel Molecular DynamicsAiichiro NakanoCollaboratory for Advanced Computing & Simulations Department of Computer Science Department of Physics & Astronomy Department of Chemical Engineering & Materials Science University of Southern California E