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Visualization Eigenstate for Nanodevices with High Symmetry D. J. Mason1,2 1Department 2The of Physics, Harvard University, Cambridge, MA Molecular Foundry, Lawrence Berkeley National Laboratory Motivation & Method User Interface Static Visualizations Graphene devices at Stanford and Columbia [1-3] Recent graphene experiments (above) increasingly use arbitrary geometries of nanoscale-tomacroscopic size. Anticipating future devices requires a thorough understanding of eigenstate contributions to their electron transmission, which can be measured macroscopically, and local density of states (LDOS), which can be measured directly with a scanning tunneling microscope. LDOS and Transmission G = [( E i )1 H] 1 LDOS (left) and eigenenergy decomposition (right) for one Fermi energy The derivation of the LDOS is handled in an external paper, while the formulation for the eigenenergy decomposition is described under the formula in the middle column. In truth, the decomposition is a function of both a generic energy (the x-axis) and the Fermi energy (E0). The user adjusts the energy slider to view a different cut of the function through the generic energy at a particular Fermi energy. The key ingredient to all calculations is the Hamiltonian which completely describes the system. We invert the Hamiltonian to obtain the Green s function matrix, whose diagonal and boundary block (red) are to calculate the LDOS and electronic transmission respectively. The algorithm employed here utilizes features of the Hamiltonian to obtain these results efficiently and automatically, and is currently being submitted for publication. User interface for eigenstate explorer We created a sophisticated user-interface to examine various features of the DOS and transmission. In the instance above, the user is in DOS-mode exploring an eigenstate whose density is plotted in red on the left and whose contribution to the total DOS is plotted in blue on the right. The user can switch between eigenstates using the left-and-right arrows, or by dragging the energy slider. Algorithms determine the best normalization for circle size in the spatial plot. Eigenstates Equation for visualizing DOS eigenenergy decomposition The DOS for a confined system is a discrete set of delta-functions. These are nearly impossible to visualize since the delta functions may overlap. Since the DOS at a particular Fermi energy has different weights, demarked C(E), this weighting further complicates the visualization. We instead convolve the delta functions with a Lorentzian of width and sum the result. The useris able to select the ideal width via the Gamma slider on the right, while the energy slider on the left determines the Fermi energy (above, E0). The LDOS and eigenenergy decomposition for one Fermi energy iare depicted in the upper-right. Eigenspaces Full DOS decomposition eigenenergy (left) and transmission self-similarity matrix (right) Clicking the read out button plots the full three-dimensional information of the eigenenergy decommposition as a single image for comparison. This can be useful for a quick summary of the information but poor for the detailed analysis the user-interface is designed for. The read out button also provides the user the transmission self-similarity matrix which is computed using the above formula. For each point in the above image, the eigenenergies associated with its x- and y-positions are compared for a similar transmission profile. White areas indicate eigenstates which contribute strongly and in tandem, giving an indication of underlying symmetries. In the above example, a few eigenstates at .75eV resonate strongly with a wide spectrum of other eigenenergies. Electron density for eigenstates of a hexagonal device By decomposing the Hamiltonian into its eigenstates, that is, the columns of the Q matrix, we can explore which energies the electrons are scattering off to produce the computed results. The above images plot the density for three eigenstates each of which Is associated with an eigenenergy. These states are important to understand since they illuminate how the geometry of the device enhances or disrupts electron transmission. Future Work 60% Acknowledgements Work at the Molecular Foundry was supported by the Director, Office of Science, Office of Basic Energy Sciences, Division of Materials Sciences and Engineering, of the U.S. Department of Energy under DE-AC02-05CH11231. Additional support provided by U.S. Department of Energy Computer Science Graduate Research Fellowship under grant number DE-FG02-97ER25308. [1] N. Stander et al. Transport measurements across a tunable potential barrier in graphene. PRL 98 (236803) 2007 [2] K. Bolotin et al. Measurement of scattering rate and minimum conductivity in graphene. PRL 99 (246803) 2007 [3] J. P. Small et al. Landau-level splitting graphene in high magnetic fields. PRL 96 (136806) 2006 10% 25% High-conductance eigenspace expressed at different rotations Devices with rotation or reflection symmetry have pairs of eigenstates, collectively called an eigenspace, that correspond to each eigenenergy. For a two-dimensional device like the ones examined in these visualizations, the user can rotate within an eigenspace in real-time using the lower slider, allowing her to see the full range of possible electron densities contributing to a single energy scattering. 5% Proposed layout for heterogenous small multiples The algorithms used to plot theDOS eigenenergy decompositon (see Variations on ThreeDimensional Data) are scientifically useful but non-intuitive. Future work will plot the eigenstates associated with the DOS and indicate their contribution by scaling their spatial plots accordingly.
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Berkeley >> CS >> 294 (Fall, 1924)
EigenstateExplorer2.0 DouglasMason Outline Disclaimer Scien9cBackground Whatsbeendone Whatcanbedone Disclaimer (notwriDenforselfpreserva9on) Background Aclosedsystemhasaresonantfrequencyfor eacheigenstatelikeaguitarstringwithxedends Backgrou...
Berkeley >> CS >> 294 (Fall, 1924)
VisualizingWIRED NicholasKong Whyvisualizetext? Informa>onretrieval MaketextpreaCen>ve Makeseman>cconnec>onsvisuallyexplicit Datamine Iden>fypaCernsinacorpus Adocumentormany,manydocuments Problem 14yearsofWIRED Visualizingtrendsoverthisper...
Berkeley >> CS >> 294 (Fall, 1924)
EigenstateExplorerv2.0: TheMidPoint DouglasMason SomeScien>cDevelopments Abilitytocorrelateinforma>onbetween eigenstatesandelectrontransmissionexci>ng newdevelopment Canisolatecontribu>onofanindividualstate, likeastandingwave,totheconductance Can...
Berkeley >> CS >> 294 (Fall, 1924)
Visualizing Multi-dimensional Data SETH HORRIGAN COMPUTER VISUALIZATION FALL 2008 Motivation Multi-dimensional datasets are common Digital cameras Wall-street stocks Motor vehicles Cellular telephones A mixture of interval, ordinal, and nomin...
Berkeley >> CS >> 294 (Fall, 1924)
VisualizingWIRED VisualizingWIRED usingStatNewssta6s6cs VisualizingWIRED usingStatNewssta6s6cs Planoverview UseStatNewsforimportancesta6s6cs Zoomableuserinterface Representdocumentsbymostrelevantkeyword Keywordsizepropor6onalto#documents Sea...
Berkeley >> CS >> 294 (Fall, 1924)
Semantic Wiki Visualization Matt Gedigian Abstract Semantic wikis are wikis which incorporate machine-readable semantic structure. The data they expose can be visualized for many different purposes using various tools. One particularly interesting us...
Berkeley >> CS >> 294 (Fall, 1924)
Survis Visualizing comparisons of many ordinal variables Seth Horrigan Objective Visualize many ordinal or categorical variables and their interrelation. Solution Nested Category Map Nested category maps are based on the design of squarified treem...
Berkeley >> CS >> 294 (Fall, 1924)
Physical Planner Legibility: Not a problem (1) Overview: Minor problem (2) Search: Major Problem (3) Tediousness: Minor Problem (2) Space Limitations: Minor Problem (2) Google Calendar Text customization: Minor Problem (2) Duplicate assi...
Berkeley >> CS >> 294 (Fall, 1924)
Palette Assistant Generating Nominal Color Encodings with Simulated Annealing Problem How can unique, quality color palettes for encoding nominal data be produced with minimal human intervention, while taking into account a designers preferences? CS...
Berkeley >> CS >> 294 (Fall, 1924)
COLOR PALETTE GENERATION FOR NOMINAL ENCODINGS Ketrina Yim, Calvin Ardi, Simon Tan CS 294-10 | Fall 2008 Problem & Motivation Color serves many functions in visualization Highlighting certain values Creating groupings Facilitating data layering Impr...
Berkeley >> CS >> 294 (Fall, 1924)
GLOBAL ENERGY SYSTEMS NAVIGATOR: AN INTERACTIVE MAP OF ENERGY AND CARBON FLOWS JEREMY HUDDLESTON LJUBA MILJKOVIC The Global Energy Systems Navigator is an interactive map of the ows of carbon and exergy the useful portion of energy through global...
Berkeley >> CS >> 294 (Fall, 1924)
Last.fm Explorer Interactive Visualization of Hierarchical Time-Series Data (Maxwell) Alex Pretzlav Stacked vs Line Future Plans Scented time slider google nance Track Drill Down User Comparison ...
Berkeley >> CS >> 294 (Fall, 1924)
Visualizing Collaborative Data Entry Forms Kuang Chen & Heather Dolan Data quality is very important The Data Entry problem Data entry is the first opportunity to address data quality Form design is often an ad hoc process New entry modalities...
Berkeley >> CS >> 294 (Fall, 1924)
Visualizing Multi-dimensional Questionnaire Data SETH HORRIGAN COMPUTER VISUALIZATION FALL 2008 Initial Concept Nesting charts to visualize many variables Project focus Visualize Likert-type or simple nominal or ordinal questions intuitively ...
Berkeley >> CS >> 294 (Fall, 1924)
Visualizing Relationships among Categorical Variables Seth Horrigan AbstractCenturies of chart-making have produced some outstanding charts tailored specifically to the data being visualized. They have also produced a myriad of less-than-outstanding ...
Berkeley >> CS >> 294 (Fall, 1924)
SEVERITY QUESTIONAIRE The following 0 to 4 rating scale shall be used to rate the severity of usability and visual problems pertaining to assignment planning (i.e. assignment organization, assignment status, etc): 0 = I don\'t agree that this is a pro...
Berkeley >> CS >> 294 (Fall, 1924)
Releviz: Visualizing similar search results in two dimensions David Eitan Poll University of California, Berkeley depoll@berkeley.edu Abstract We present Releviz, a system that provides a two-dimensional interface for selecting and displaying multiva...
Berkeley >> CS >> 294 (Fall, 1924)
Last.fm Explorer Interactive Visualization of Hierarchical Time-Series Data Tons of Data A Few Strong Visualizations Lee Byrons Streamgraph http:/www.leebyron.com/else/streamgraph/download.php? le=stackedgraphs_byron_wattenberg.pdf Last.fm Spiral...
Berkeley >> CS >> 294 (Fall, 1924)
Maps of 3D Environments James F Hamlin Problem and Motivation Automatically-generated 2D maps are now commonly used. The problem of automatically generating maps displaying paths between two locations easily extends to 3D environments. Such maps may ...
Berkeley >> CS >> 294 (Fall, 1924)
Last.fm Explorer: An Interactive Visualization of Hierarchical Time-Series Data Maxwell A. Pretzlav University of California, Berkeley alex@turnlav.net ABSTRACT This paper describes an interactive web-based visualization of a large and complex datas...
Berkeley >> CS >> 294 (Fall, 1924)
1 Visualizing Eigenstates of Nanotransistors with Arbitrary Shape Douglas J. Mason I. I NTRODUCTION Developing a thorough understanding of physical data from simulated systems have proven a difcult task. In the eld of quantum chemistry large softwa...
Berkeley >> CS >> 294 (Fall, 1924)
Midpoint Design Discussion COLOuR PALETTE GENERATION FOR NOMINAL ENCODINGS Ketrina Yim, Simon Tan, Calvin Ardi CS 294-10 | Fall 2008 Project Q: How can we produce unique, quality palettes with minimal human intervention? A: Algorithmically (simulat...
Berkeley >> CS >> 294 (Fall, 1924)
Mapping 3D Environments James F Hamlin Edward Tufte. Visual Explanations. Graphics Press, 1997. From Navtej Sadhal. The Presentation of 3D Maps of Building Interiors for Easy Way-Finding. Project Description Generate static and interactive maps sh...
Berkeley >> CS >> 294 (Fall, 1924)
Automatically Generated Maps of 3D Environments James F. Hamlin University of California, Berkeley Abstract A system for generating visualizations of routes in 3D environments is presented. From the input of a 3D triangle mesh, the approximate heigh...
Berkeley >> CS >> 294 (Fall, 1924)
GLOBAL ENERGY SYSTEMS NAVIGATOR: AN INTERACTIVE VISUALIZATION OF ENERGY AND CARBON FLOWS Ljuba Miljkovic UC Berkeley, School of Information ljuba.miljkovic@gmail.com Jeremy Huddleston UC Berkeley, Department of Computer Science jeremyhu@berkeley.edu ...
Berkeley >> CS >> 294 (Fall, 1924)
Color Palette Generation for Nominal Encodings Calvin Ardi Computer Science University of California, Berkeley Berkeley, CA +1 510 642 8679 calvin@rescomp.berkeley.edu Simon Tan Computer Science University of California, Berkeley Berkeley, CA +1 510 ...
Berkeley >> CS >> 294 (Fall, 1924)
StatVis: Visualization of Statistical Analysis of News Data Nicholas Kong University of California, Berkeley nkong@eecs.berkeley.edu ABSTRACT We describe a visualization of statistical analysis of news data, specifically the headlines of the New Yo...
Berkeley >> CS >> 294 (Fall, 1924)
...
Berkeley >> CS >> 294 (Fall, 1924)
The Visual Design and Control of Trellis Display Richard A. Becker William S. Cleveland Ming-Jen Shyu 1750 V V E-W S-N S-N E-W V 1700 S-N E-W 1650 1600 V S-N E-W V S-N E-W 1550 1500 V V S-N E-W S-N E-W V E-W S-N 1450 Figure 1: Trellis di...
Berkeley >> CS >> 294 (Fall, 1924)
Global Energy Systems Navigator Ljuba Miljkovic & Jeremy Huddleston CS294 - Visualization Final Project Proposal Climate Change Existing Visualizations Exergy Solar Radiation Solar Radiation 120000 120000 62000 62000 Surface Extra-solar Surfac...
Berkeley >> EE >> 100 (Fall, 2008)
LM2940/LM2940C 1A Low Dropout Regulator January 2007 LM2940/LM2940C 1A Low Dropout Regulator General Description The LM2940/LM2940C positive voltage regulator features the ability to source 1A of output current with a dropout voltage of typically 0...
Berkeley >> EE >> 100 (Fall, 2008)
! \" # $ # %+ ,( ),)1 2\'(30)1 22 , ) 4),\', 6,\'.%* (/,-7/\',4\'-( ., 9)2& ,9 ) + )...
Berkeley >> EE >> 100 (Fall, 2008)
LM2937 500 mA Low Dropout Regulator August 2005 LM2937 500 mA Low Dropout Regulator General Description The LM2937 is a positive voltage regulator capable of supplying up to 500 mA of load current. The use of a PNP power transistor provides a low d...
Berkeley >> EE >> 100 (Fall, 2008)
Freescale Semiconductor Technical Data MMA7260Q Rev 1, 06/2005 1.5g - 6g Three Axis Low-g Micromachined Accelerometer The MMA7260Q low cost capacitive micromachined accelerometer features signal conditioning, a 1-pole low pass filter, temperature c...
Berkeley >> EE >> 100 (Fall, 2008)
EECS 100 Boost Converter Laboratory L. Chua University of California Berkeley Department of Electrical Engineering and Computer Sciences EECS 100, Professor Leon Chua LABORATORY 7 v3 BOOST CONVERTER In many situations circuits require a differen...
Berkeley >> EE >> 100 (Fall, 2008)
Fill out information below and attach this cover sheet to the FRONT of your HW. If you do not (or enter incorrect information) you WILL loose 10 points on the HW. NAME:_ SID #:_ Circle One: EE42 / EE100 If EE100, Lab Day:_,Time:_ EE 100 Homework # 1...
Berkeley >> EE >> 100 (Fall, 2008)
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Berkeley >> EE >> 100 (Fall, 2008)
EE 43/100 - Final Project Audio Amplifier, Part II EE43 Fall 2005 Project: 1: Audio Amplifier, Part II EE 43/100 FINAL PROJECT: AUDIO AMPLIFIER EE 43 PROJECT 1: AN AN AUDIO AMPLIFIER Part 2: Audio Amplifier Prelab Amplifier Block Diagram In this l...
Berkeley >> EE >> 100 (Fall, 2008)
EECS 100 Fall 2004 REVIEW PROBLEMS FOR THE FINAL Muthuswamy, Bharathwaj I. Introduction 1. There are a total of 14 problems in this review handout. Problems 1 through 3 serve as review of basic material. The final exam is going to concentrate on p...
Berkeley >> EE >> 100 (Fall, 2008)
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Berkeley >> EE >> 100 (Fall, 2008)
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Berkeley >> EE >> 100 (Fall, 2008)
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Berkeley >> EE >> 100 (Fall, 2008)
EE 100/42 Spring 2009 Solutions to Homework 1 1.9 The positive reference for V is terminal b, where the head of arrow is pointing. Then, we have V V 12V. Also, i is the current entering terminal a, and i is the current leaving terminal a. Then, we ha...
Berkeley >> EE >> 06 (Fall, 2009)
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Berkeley >> EE >> 100 (Fall, 2008)
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Berkeley >> EE >> 100 (Fall, 2008)
EE100 Summer 2004 Midterm Solutions ...
Berkeley >> EE >> 100 (Fall, 2008)
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Berkeley >> EE >> 05 (Fall, 2008)
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Berkeley >> EE >> 100 (Fall, 2008)
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Berkeley >> EE >> 100 (Fall, 2008)
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Berkeley >> EE >> 100 (Fall, 2008)
EECS 100 RC Circuits EE100 Lab 3 Experiment Guide: RC Circuits I. Introduction A. Capacitors A capacitor is a passive electronic component that stores energy in the form of an electrostatic field. The unit of capacitance is the farad (coulomb/volt)...
Berkeley >> EE >> 100 (Fall, 2008)
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Berkeley >> EE >> 100 (Fall, 2008)
EECS 100 Timers and Oscillators University of California Berkeley Department of Electrical Engineering and Computer Sciences EECS 100, Professor Bernhard Boser, Professor Leon O. Chua B. Boser L. Chua LABORATORY 6 v2 TIMERS AND OSCILLATORS 1. Time...
Berkeley >> EE >> 100 (Fall, 2008)
Fill out information below and attach this cover sheet to the FRONT of your HW. If you do not (or enter incorrect information) you WILL loose 10 points on the HW. NAME:_ SID #:_ Circle One: EE42 / EE100 If EE100, Lab Day:_,Time:_ EE 100 Homework # ...
Berkeley >> EE >> 100 (Fall, 2008)
Fill out information below and attach this cover sheet to the FRONT of your HW. If you do not (or enter incorrect information) you WILL loose 10 points on the HW. NAME:_ SID #:_ Circle One: EE42 / EE100 EE 100 Homework # 14 L. Chua Issued : Nov. 26 ...
Berkeley >> EE >> 100 (Fall, 2008)
EE100 Fall 2008 Project B. Muthuswamy and M. John University of California Berkeley Department of Electrical Engineering and Computer Sciences Professor Leon O. Chua LED DISPLAY DRIVER BOARD 1. Introduction In this project, you will build an LED d...
Berkeley >> EE >> 100 (Fall, 2008)
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Berkeley >> EE >> 3 (Summer, 2009)
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Berkeley >> EE >> 100 (Fall, 2008)
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Berkeley >> EE >> 100 (Fall, 2008)
Summer 2007 EE100/EE43 Lab 3 EECS 100/43 Lab 3 Capacitors and Inductors 1. Objective In this lab you learn about RC and RL circuits 2. Equipment a. Breadboard b. Wire cutters c. Wires d. Oscilloscope e. Function Generator f. 1k resistor x 2 g. 1uf...
Berkeley >> EE >> 100 (Fall, 2008)
Chapter 9 and Chapter 1 from reader OUTLINE Phasors as notation for Sinusoids Arithmetic with Complex Numbers Complex impedances Circuit analysis using complex impdenaces Dervative/Integration as multiplication/division Phasor Relationship for...
Berkeley >> EE >> 100 (Fall, 2008)
UNIVERSITY OF CALIFORNIA, BERKELEY EE100 Summer 2008 Lab 6 RC Filters Prelab Name:_ TA:_ Session:_ 1. In this lab you will explore the two RC filters shown in the Description and Background section of the Experiment Guide. Derive the equations (1) a...
Berkeley >> EE >> 100 (Fall, 2008)
University of California Berkeley Department of Electrical Engineering and Computer Sciences EECS 100, Professor Leon Chua LABORATORY 2 v1 CIRCUIT SIMULATION WITH MULTISIM Practical circuit design occurs in three stages: 1. Design of an appropriate...
Berkeley >> EE >> 100 (Fall, 2008)
i, mA 3 3 i (t ), mA = Rf C 2 1 30 15 0 1 2 15 30 1 v, V 0 1 T 2 T 3T 2 2T t, s 2 3 2 3 v(t ), V 30 15 0 15 30 = Rf C = Rf C T 2 T = Rf C 3T 2 2T t, s i, mA i (t ), mA 3 3 = Rf C 2 1 30 15 2 15 30 1 v, V 0 1 0 1 T 2 T...
Berkeley >> EE >> 100 (Fall, 2008)
Fill out information below and attach this cover sheet to the FRONT of your HW. If you do not (or enter incorrect information) you WILL loose 10 points on the HW. NAME:_ SID #:_ Circle One: EE42 / EE100 If EE100, Lab Day:_,Time:_ L. Chua Issued : Sep...
Berkeley >> EE >> 100 (Fall, 2008)
!\" # $ %+ ,( ),)1 2\'(30)1 22 , ) 4),\', 6,\'.%*(/,-7/\',4\'-(19)2+*)(/...
Berkeley >> CS >> 164 (Fall, 2008)
IA-32 Intel Architecture Software Developers Manual Volume 3: System Programming Guide NOTE: The IA-32 Intel Architecture Software Developers Manual consists of four volumes: Basic Architecture, Order Number 253665; Instruction Set Reference A-M, Or...
Berkeley >> CS >> 164 (Fall, 2008)
IA-32 Intel Architecture Software Developers Manual Volume 2B: Instruction Set Reference, N-Z NOTE: The IA-32 Intel Architecture Software Developers Manual consists of four volumes: Basic Architecture, Order Number 253665; Instruction Set Reference ...
Berkeley >> CS >> 164 (Fall, 2008)
Lecture #41: Topics in Static Analysis: Program Verification Previously looked at static analysis, finding properties of programs that dont depend on the specific input data. So far, have seen: Static type checking (are these types consistent?) ...
Berkeley >> CS >> 164 (Fall, 2008)
The Activation Record (AR) [Notes adapted from R. Bodik; updated 5/2/2005] Code for function calls and function definitions depends on the layout of the activation record Very simple AR suffices for this language: The result is always in the acc...
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