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Genet+Chapters+5+and+6

Course: BIOL 2156, Spring 2008
School: LSU
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5 Ch. Opening: In 1910, T. H. Morgan discovered a white-eyed mutation with unusual "sex-linked" inheritance T.H. Morgan, Drosophila, and Sexlinkage T.H. Morgan started genetic studies with fruit flies (Drosophila melanogaster), 19091930s. Made many discoveries, but the first was discovery of sex-linkage. Sex linkage of white-eyed mutant (w) was important proof that genes were on chromosomes....

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5 Ch. Opening: In 1910, T. H. Morgan discovered a white-eyed mutation with unusual "sex-linked" inheritance T.H. Morgan, Drosophila, and Sexlinkage T.H. Morgan started genetic studies with fruit flies (Drosophila melanogaster), 19091930s. Made many discoveries, but the first was discovery of sex-linkage. Sex linkage of white-eyed mutant (w) was important proof that genes were on chromosomes. Fig. 5.2 Human Sex Chromosomes Differ in size and morphology Terminal regions similar, but few genes in common. Y has few genes, X many genes X and Y pair and disjoin in meiosis as if they were homologous chromosomes More on sex chromosomes Many organisms have sex chromosomes like X and Y. Chromosomes other than sex chr.= autosomes. XY males are said to be hemizygous, have only one copy of X chr. genes. XY males always show phenotype of recessive alleles of X chr. genes. Morgan's observation: Crossed red-eyed female to white-eyed male. F1 all red eyes. F2 all females red eyes, males 1/2 red and 1/2 white. Fig. 5.3 Morgan's hypothesis diagramed w is on X chr. There is no w+ allele on Y Fig. 5.4a Tests of predictions of Morgan's Hypothesis Draw Punnett squares of all crosses in Fig. 6.4 for practice. Fig. 5.4b Tests of predictions of Morgan's Hypothesis A male gets his X chromosome from his mother, not from his father! These observations by Morgan were first direct evidence placing a gene on a specific chromosome. Fig. 5.6 Bridges explained these exceptions as examples of nondisjunction in aberrant meioses. Review Fig. 5.7 and 5.8: Chromosomal basis of Segregation and Independent Assortment Sex linkage in human pedigrees: Carriers always female. Affected individuals are usually (but not always) male. Remember that males get their X from mother, and females get an X from each parent. Fig. 5.9 X-linked hemophilia in European Royalty New mutation Fig. 5.10 Analysis of an X-linked pedigree for color-blindness Fig. 5.11 Human sex determination SRY gene on Y chr. encodes Testis Determining Factor (TDF) Drosophila sex determination depends on X:A ratio (not in book) Male: X:A ratio=0.5 Female: X:A ratio=1.0 Problem: Females have two copies of each X chr. gene, but males have only one copy. Many X chr. genes needed equally by both sexes. Drosophia and mammals solve this problem different in ways. Dosage compensation in Drosophila When Sxl is off (in males), X chr. genes are transcribed twice as much. Fig. 5.16 X chr. inactivation in mammals. Mammals solve problem of X dosage by inactivating one X in female embryos at 1000 cell stage. X-inactivation and the calico cat Consider a cat heterozygous for alleles of X-linked gene o. Genotype = Oo O = black coat, o = orange coat (recessive). When X-inactivation occurs, either O or o allele is on inactivated X --> patches of orange or black fur! Fig. 5.17 Color mosaics in female mammals Tortoiseshell cat Calico cat White markings come from another gene All tortoiseshell cats are female. What about Oo males? OY males are solid black. There are no Oo males (X-linked)! Fig. 5.18 Barr bodies are only in female nuclei XY male Nucleoli B B XX female B Ch. 6 chromosome number and structure variation Cytogenetics and karyotype. Variation in chr. number. Polyploidy and aneuploidy Variation in chr. structure. Deletions, duplications, inversions, and translocations. Skip pp. 159 (middle)-end of chapter Fig. 6.8 Origin of a plant species by hybridization and chr. doubling Initial hybrid sterile (poor meiotic pairing) Chr. doubling creates fertile teraploid. Fig. 6.9 Origin of hexaploid wheat Two rounds of hybridization and doubling Aneuploidy: A change in number of part of chr. set, gain or loss of a single chr. Examples: Down syndrome: Chr. 21 trisomy Klinfelter syndrome: XXY sterile male Turner syndrome: XO female (monosomy for X) Fig. 6.13 Down syndrome karyotype Chr. 21 trisomy Changes in chromosome structure: Normal chr.- ABCDEF Deletion (Deficiency)- ABEF Cri-du-chat syndrome= deletion chr. 5 Duplication- ABCDCDEF Fig. 6.16 Cri-du-chat syndrome Deletion Changes in chromosome structure (continued): Inversion- ABDCEF Translocation- Exchange between two different chr. Fig. 6.19 Structure of an inversion Fig. 6.20 Pericentric and paracentric inversions Fig. 6.21 Pairing in inversion heterozygotes Chromosome pairing of normal and inverted chromosomes forms a loop. Paired chr. in inversion heterozygote Fig. 6.22 Structure and pairing of translocations Reciprocal translocatons involve exchange between two chr. Altered pairing of translocation homologs in meiosis can cause mis-segregation of chr.
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LSU - BIOL - 2156
Homework 2 Dr. Larkin's Problems A) sc sc (red eyes no brown pigment) br br (brown eyes no red pigment) sc sc br br (white eyes no pigment) sc+sc = wild type eyes br+ br sc sc = bright red eyes sc+sc = brown eyes br br sc sc = white eyes
LSU - BIOL - 2156
Genetics 2153 Homework #1 (10 points total) Due Jan 30/ Feb 1 (NOTE CHANGED DATE!). Problems from book to hand in (3 points): 2.4, 2.5, 2.9, 2.10, 2.11, 2.12, 2.13, 2.15; 3.3, 3.4, 3.5, 3.6, 3.7, 3.8, 3.9, 3.10, 3.11, 3.13, 3.14 (use 2 for 3.11, 3.13
LSU - BIOL - 2156
Genetics 2153, Homework #2 (Due Feb. 13/15) Required Problems to hand in from book (4 points): 4.3, 4.5, 4.7, 4.8, 4.10, 4.12, 4.13, 4.18, 4.20, 4.21, 4.26, 4.27, 4.28. 25.1, 5.1, 5.4, 5.6, 5.7, 5.10, 5.12, 5.13, 5.17, 5.22 Recommended additional pro
LSU - BIOL - 2156
Hise, Taylor BIOL 2153-12 Homework Chapter 2 and 3 2.4, 2.5, 2.9, 2.10, 2.11, 2.12, 2.13, 2.15 2.4: Haploid: cells that have a single set of chromosomes, such as gametes Diploid: cells that carry 2 sets of identical chromosomes, such as zygotes and b
LSU - BIOL - 2051
Book chapter sections covered in lectureM 27 August 2007 - 1.1-1.5, 2.3-2.6, 4.1, 4.3 W 29 August 2007 - 4.4, 3.1-3.8 M 3 September 2007 No lecture W 5 September 2007 - 4.5-4.6, 4.8-4.10, 4.14 M 10 September 2007 4.15-4.16, 4.11-4.13, 14.1-14.5 Th
LSU - BIOL - 2051
EXAM 1- copied from 1-note MICRO INTRO: Microbes are everywhere! What is microbiology? o Study of cells and organisms too small to be seen with the naked eye Bacteria Viruses Protozoans Fungi Algae Diatoms o Microorganisms can be single cells o
Wisc Stout - HDFL - 335
Jillian Clarey HDFL-335 American Indian Families (2-3 Pages, Double Spaced) Summarize. - Culture (Check) - Family Structure (Check) - Child Rearing (Check) - (+) Current Issues (Check) . that would be important to know about when working with childre
Wisc Stout - HDFL - 124
Chapter 1: History, Theories and MethodsThe Field of Child Development Seeks to understand all aspects of human development and change from conception through adolescence. Is part of the discipline described as Developmental Psychology, Human Devel
Wisc Stout - HDFL - 124
Chapter 2: Heredity and ConceptionBiological and Genetic Foundations Heredity and environment are the foundations of development Heredity: The biological transmission of traits and characteristics from one generation to another. Chromosomes: Store/
Wisc Stout - HDFL - 124
Chapter 3: Prenatal DevelopmentParenthood Why have children? o In the past, many people had children because it was biologically or culturally expected. o Today, many people are postponing having children until they are older or finish their educat
Wisc Stout - HDFL - 124
Chapter 4: Birth and the Newborn BabyStages of Childbirth - There are several signs that labor is near o False labor: uterine contractions that may last several weeks o About two week before birth, lightening occurs o This is the time when the baby
Wisc Stout - HDFL - 124
Chapter 5: Infancy: Physical Development Physical Development in Infancy and Toddlerhood Body Growth Changes in body proportions - Growth happens in spurts - Infant gains "baby fat" through first 9 months, then begins to get slimmer - Girls tend to b
Wisc Stout - HDFL - 124
Chapter 6: Infancy: Cognitive Development What is Cognitive Development? Cognitive development focuses on the development of children's ways of perceiving and mentally representing the world Piaget: Believed that children's cognitive processes develo
Wisc Stout - HDFL - 124
Chapter 7: Infancy: Social and Emotional Development Social and Emotional Development According to Erikson Erik Erikson identified 8 stages through with people progress throughout their lifetime (page 10 of the textbook). Four of these stages occur d
Wisc Stout - HDFL - 124
Health Care Policies in the U.S. U.S. Health Care Policies Although the U.S. has the most up-to-date health care technology in the world, it has made less progress than other countries in working to reduce infant deaths Infant Mortality In the past 3
Wisc Stout - HDFL - 124
9 Early Childhood Cognitive DevelopmentCognitive Development in Early Childhood Piaget's Theory: o The Preoperational Stage (ages 2-7) Advances in mental representation: Increased language skills Pretend and make-believe play helps children under
Wisc Stout - HDFL - 124
Chapter 8 Early Childhood: Physical Development Ages 2 through 6-Physical Development in Early Childhood Body Growth o 2 to 3 inches in height each year o 5 pounds in weight each year o By the end of the preschool years, children start to lose th
Wisc Stout - HDFL - 124
Chapter 10 Early Childhood Social and Emotional DevelopmentEmotional and Social Development in Early Childhood Erikson's theory: Intuitive vs. Guilt (Psychosocial development, eight stages that you need to accomplish to proceed to the next one) Psy
Wisc Stout - HDFL - 124
Chapter 11 Middle Childhood: Physical Development Exam is Tuesday, December 19th 8:00-9:50am Study Guide December 15thMiddle Childhood: Children between the ages of 6 and 12 Physical Development in Middle Childhood Children add about 2-3 inches in
Wisc Stout - HDFL - 124
12 Middle Childhood: Cognitive DevelopmentPiaget's Theory: Concrete Operational Stage - Spans ages 7-12 - Thoughts become more logical, flexible and organized compared to early childhood - Decentration: Focusing on several aspects of a problem at o
Wisc Stout - HDFL - 124
Chapter 13 Middle Childhood: Emotional and Social Development Erikson's Theory: Industry vs. Inferiority - The psychological conflict of middle childhood - It is resolved positively when experiences help children develop a sense of competence at usef
Wisc Stout - PSYC - 100
General Psychology Chapter 1 PROLOGUE: Just a Game?Introduction: The Origins of PsychologyKey Theme Today, psychology is defined as the science of behavior and mental processes, a definition that reflects psychology's origins and histories. Key Qu
Wisc Stout - PSYC - 100
General Psychology Chapter 2 PROLOGUE: Asha's Story Introduction: Neuroscience and Behavior VOCAB: Biological Psychology Specialized branch of psychology that studies the relationship between behavior and bodily processes and systems; also called bio
Wisc Stout - PSYC - 100
ESP: Can Perception Occur Without Sensation? ESP: perception of information by some means other than through the normal processes of sensation. Forms of ESP include: o Telepathy: direct communication between the minds of two individuals. o Clairvoyan
Wisc Stout - PSYC - 100
Chapter 6: Memory Prologue: The Drowning -Elizabeth Loftus first remembers the details of her mother's death at her Uncle Joe's house in Pennsylvania. -Later, after being reminded, she can remember that she was the one to discover her mother's dead b
Wisc Stout - PSYC - 100
Consciousness and Its Variations Prologue: A Scream in the Night A couple, Mike and Nina are newlywed and beginning to adjust to a new nightly-routine. Nina had recently switched from working night shifts to day shifts so that her schedule meshed bet
Wisc Stout - PSYC - 100
LearningPrologue: The Killer Attic Introduction: What Is Learning? Key Theme: Learning refers to a relatively enduring change in behavior or knowledge as a result of experience. Key Questions What is conditioning? What are three basic types of lear
LSU - CHEM - 2262
Compound light microscopeTransmission electron microscopeScanning electron microscopeMycobacterium leprae visualized by SEMMycobacterium leprae visualized by TEMPrimary structure of a polypeptideSecondary structure formed by RNAFree-liv
LSU - BIOL - 2051
Biology 2051- Sections 8-11 General Microbiology Fall 2007 Instructor: Dr. Ginger Brininstool Phone: 578-4089 E-mail: sbgbrinin@lsu.edu 602 Life Sciences Bldg M-Th 10-11:30am or by appointment Mondays and Wednesdays 1:40-3pm in 9 Lockett 136 Life Sci
LSU - BIOL - 2051
Note: Here is a list of figures shown in lecture. There are other figures in your textbook which you may find useful to you in trying to understand the material. Figures shown in lecture that are not in your textbook will be a Powerpoint presentation
LSU - BIOL - 2051
Note: Here is a list of figures shown in lecture. There are other figures in your textbook which you may find useful to you in trying to understand the material. Figures shown in lecture that are not in your textbook will be a Powerpoint presentation
LSU - BIOL - 2051
Cell Growth Chapter 6 I. Binary FissionA. DNA Replication B. Formation of Divisome1. FtsZ 2. FtsAC. Cell Elongation1. FtsI 2. FtsK 3. MreBD. Septum Formation E. Cell SeparationII. AutolysinsA. Autolysis1III.Cell Wall SynthesisA. N-ace
LSU - BIOL - 2051
*Begin EXAM 2 * Macronutrients Elements required in fairly large amounts (Table 5.1- Macronutrients in nature and in culture media) o Carbon Need to make organic compounds such as amino acids, fatty acids, sugars, and nitrogenous bases Autotrophs Us
Cornell - BIO G - 101
Features Cnidaria HydraBody symmetry Radial SymmetryTissue Layers DIPLOblasticPlatyhelminthes Bilateral symmetry Planaria Nematoda Vinegar eels Rotifera Rotifers Mollusca Clam Squid Bilateral symmetry Bilateral symmetry Bilateral symmetryTRIP
LSU - BIOL - 2051
Exam 2 Chapter 6- Microbial Growth PART I Bacterial Cell Division 6.1 Cell Growth and Binary Fission, p. 136 Microbial growth involves an increase in the number of cells. In addition to understanding the basic science of microbial growth, there are m
Cornell - BIO G - 101
Katherine Roll Biology Lab 10/14/2005The Effect of Humidity on The Taxis of Armadillidium VulgareAbstract The isopod experiment, based on observations in nature, was designed to test whether isopods prefer a moist versus a dry living environment.
Cornell - BIO G - 101
1. A. Chemical work at the cellular level a. Creating (electro)chemical gradients i. Specific example: Oxidative Phosphorylation (during cellular respiration) 1. Electron Transport Chain a. "falling electron", -G b. Electron passed from one carrier t
LSU - BIOL - 2051
1 9-18 Ch. 6 Microbial Growth Bacterial Cell Division 6.1 Cell Growth and Binary Fission, p.136 Growth of most microorganisms occurs by the process of binary fission Fig. 6-1 1. DNA replication 2. Cell elongation 3. Septum formation - where the actua
Cornell - BIO G - 104
Katherine Roll Plant Biology 4/13/2006 It is advantageous for the root to grow and develop more rapidly than the shoot. The root anchors the shoot and provides water and nutrients for the shoot to grow. Roots with many root hairs have a greater absor
Cornell - HD - 250
Katherine Roll 3/15/06 "Walk the Line" and Family Life I chose to watch the movie "Walk the Line," which was released in 2005, because it is a musical biography of Johnny Cash and I enjoy listening to Johnny Cash's music. I would rate "Walk the Line"
LSU - BIOL - 2051
Exam 2 Methods to study microorganisms *Begin EXAM 2 * Macronutrients o Elements required in fairly large amounts (Table 5.1- Macronutrients in nature and in culture media) o Collection on required macromolecules o Carbon Need to make organic compoun
LSU - BIOL - 2051
Example in class: Time 1 hr 2 hr 3 hr 4 hr 5 hr 6 hr 7 hr 8 hr 9 hr 10 hr # of cells 1.6 x 107 2.2 x 107 3.1 x 107 4.3 x 107 6.0 x 107 8.3 x 107 1.3 x 108 1.6 x 108 2.2 x 108 3.0 x 108What is the generation time? 2 hr 5 minAnother example: Time 2
LSU - BIOL - 2051
Figures shown in lecture that are not in your textbookChemical antimicrobial agents used to control microorganisms that are harmful to humans:Sterilants;destroy all forms of microbial lifeDisinfectants kill microorganisms, but endospores are
LSU - BIOL - 2051
List of Figures for Exam 2 Methods to study microorganisms 5.1b iron-chelating siderophore, E. coli enterobactin 5.1c iron-chelating siderophore, aquachelin 5.3 aseptic technique 5.2a streak plate 5.2b isolated colonies (pure cultures) from the strea
LSU - BIOL - 2051
LSU - BIOL - 2051
GC ratio% of guanine + cytosine in an organism's DNA > 5% difference in GC means the 2 organisms of are 2 different speciesDNA:DNA Hybridizationtests ability of denatured DNA in single strand form from 2 organisms to bond (anneal) to each other
LSU - BIOL - 2051
Diversity (Chapters 11) Early Life Planet Earth is at least 4 billion years old First evidence for microbial life can be found in rocks about 3.86 billion years old Stromatolites are fossilized microbial mats consisting of layers of filamentous proka
LSU - BIOL - 2051
Prokaryotic Diversity Bacteria (Chapter 12) Phylum 1: Proteobacteria all Gram negative metabolically diverse. Purple phototrophic bacteria Anoxygenic phototrophs Purple sulfur bacteria, Ex. Chromatium H2S as electron donor Form sulfur globules Found
LSU - BIOL - 2051
General Facts PROTEOBACTERIA anoxygenic phototrophPurple Phototropic BacteriaPurple sulfur bacteria Chromatium H2S as electron donar forms sulfur globules found in illuminated anoxic zones of lakesPurple non-sulfur bacteriaRhodobacter
LSU - BIOL - 2051
Diversity (Chapters 11) Early Life Planet Earth is at least _. First evidence for microbial life can be found in _. _ are fossilized microbial mats consisting of layers of filamentous prokaryotes and trapped sediment. The phototrophic green nonsulfur
LSU - BIOL - 2051
Prokaryotic DiversityBacteria (Chapter 12) Phylum 1: _ all Gram _; metabolically diverse.Purple phototrophic bacteria Anoxygenic phototrophs Purple sulfur bacteria, Ex. Chromatium _ as electron donor Form sulfur _ Found in _ zones of lakes Pur
LSU - BIOL - 2051
DNAProkaryoteNucleoid Circular chromosome Double stranded helix supercoiled by DNA gyrasesEukaryoteNucleus Linear chromosomes Double stranded helix wound around histones to form nucleosomeExtrachromosomal plasmids Transposable elementsPlasmi
LSU - BIOL - 2051
ArchaeaEuyarchaeotaCrenarchaeotananoarchaeotaextreme halophilesmethanogensthermoplasmataleshyperthermophilesferroglobushyperthermophilespsycrophilesthermophilesacidophilessulfolobuspyrolobus=-EukaryaProtozoaSlime m
LSU - BIOL - 2051
Enyme repression Occurs when sufficient product is present to synthesis of enzymes no longer needed (8-11) Arg operonNegative Control ProkaryotesEnzyme induction Occurs when substrate is present to make enzymes needed to use substrate Lac ope
LSU - BIOL - 2051
List of Figures for Exam 3 Genetics 7.4 structure of DNA 7.5 computer model of DNA 7.8d supercoiled chromosomal DNA in a prokaryote 7.9 DNA wound around histone proteins to form a nucleosome in a eukaryote 7.2a prokaryote gene structure - no introns,
LSU - BIOL - 2051
Chlorophylls/bacteriophyllscentral pigments of photosynthesis chlorophylls: oxygenic phoyosynthesis Bacteriochlorophylls: anoxygenic photosynthesis embedded in photosynthetic membrane absorb different wavelengths of lightPIGMENTS!caratenoids
Cornell - ORIE - 320
6 7 61 6 22 5 49Cij = cost (in $10 ) of locating fab i at site j.X11 X12 X13 X21 X22 X23 X31 X32 X33Xij = 1 if fab i is located at site j Xij = 0 if fab i is not located at site jOR&IE 320/520 Prof. Bland8/23/07minimize 6x11 + 1x12 +
Cornell - ORIE - 320
OR&IE 320/520 Prof. Bland8/23/07What follows is a progression of algebraic models for the brewery problem. The first model is very simple and natural. It corresponds directly to the AMPL model brewery1.txt. You should be able to see readily that
Cornell - ORIE - 320
OR 320/520 Optimization I Prof. Bland10/30/07Complementary Slacknesssee BHM section 4.5 Consider a standard form linear programming problem (P) and its dual (D): max cx min yb (P ) s.t. Ax b (D) s.t. yA c x0 y0 Assume that A is m n A pair of
LSU - BIOL - 2051
Metabolism- sum of al reactions both catabolic and anabolic Catabolic- energy producing Anabolic- biosynthetic (energy-using) Oxidation-Reduction reactions (Redox) o Oxidation- loss of electrons o Reduction- gains electrons o Redox reactions are coup
Cornell - ORIE - 320
ORIE 320 Professor Bland9/10/07Convexity, Polyhedra, Extreme Points A set S IRn is convex if for all points x1 , x2 S the point (1 - )x1 + x2 S, for all 0 1. Can you give a geometric interpretation of this property? Note that the intersecti