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PAE1830.t06.str2-logo

Course: PAE 1830, Fall 2009
School: UCSC
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Word Count: 125

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str2 4 PAE1830.t06 3 2 1 1 10 20 30 40 H 4 3 2 1 A H Z Y Z A Z Y Z Y Z H T H T G Z 51 60 70 80 90 Z Y Z Y Z 4 3 2 1 T S H A Z T Q P Q T H T Z Y Z 101 110 120 130 140 G 4 3 2 1 T H T Q P Q G H 151 160 T T T H 170 SG ANWTA D PFKNSLGVLTELVASRDD T 150 LP L KPLLS NLPLLAEWLEVLEPEATVF S TP V ES L G DV K S P LD V A A LL V E L 100 VD I KWAEA KGRDKFNVYVYREDVQLIR V NP Y AP...

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Coursehero >> California >> UCSC >> PAE 1830

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str2 4 PAE1830.t06 3 2 1 1 10 20 30 40 H 4 3 2...
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UCSC - PAE - 1830
PAE1830.t06 str43 2 1110203040H 3 2 1D S G ED E D E VS HG T HE S V EE Q E5160708090Q 3 2 1R Q R Q E Q S G S H GEA B ES G EE Q E Q V S G V S VS HI G TE Q E101110120130140Q E V S 3 2 1H
UCSC - PAE - 1830
PAE1830.t06 w0.53 2 1110203040H 3 2 1A H Z Y Z AZ Y Z Y ZHTHT G Z5160708090Z Y Z Y Z 3 2 1T SHAZTQ PQTHTZ Y Z101110120130140G 3 2 1THTQ P QGH151160TTTH17
UCSC - PAE - 2311
PAE2311 dssp-ehl22 110203040H 2 1EEHE51LL T FVE501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t04 CB8-sep92 110203040A 2 1G D A D F B A F E A EAE G I K J I G F E D GA EAEA GA E G D E FG IJ I H51LL T FVEG D501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t04 CB_burial_14_72 110203040A 2 1EAE BDB D E B AB D FE D B D B E D B D E AD B A E F D A E A D A D F51LL T FVEE D A501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t04 alpha2 110203040H 2 1B S E G EAB S B A EH E HS E B S E51LL T FVEA E501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t04 bys4 3 2 1110203040E H 4 3 2 1G T PY EP T PE Y EHD P T E51LL T FVE50MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t04 dssp-ehl22 110203040H 2 1EEHE51LL T FVE501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t04 n_notor23 2 1110203040N 3 2 1HNBNBN B NHNBP51LL T FVEB N50MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t04 n_sep5 4 3 2 110203040D 5 4 3 2 1HD I D AP D A G A K D ADHDA51LL T FVE501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t04 near-backbone-113 2 1110203040A D I E 3 2 1D JI GG JG A B E GI KG D G D J G D G I A D G DG I GI D GIK J H51LL T FVEI D50MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t04 o_notor23 2 1110203040H 3 2 1M NBG NB N A BNHNB51LL T FVEN50MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t04 o_sep4 3 2 1110203040H 4 3 2 1BDAG DP A D A D HDA51LL T FVED50MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t04 pb5 4 3 2 110203040D M 5 4 3 2 1N O P ADEH I A F B DDM KMDE H D AD51LL T FVE501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t04 str25 4 3 2 110203040H 5 4 3 2 1TTAY TY Z E Y Z YHTZ A51LL T FVE501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t04 w0.52 110203040H 2 1I G T S E BA EE A B E Q S HSV S Q E B51LL T FVE501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t06 CB8-sep92 110203040A 2 1F D A D F AF E A EAE G I K J I G EFGE F AEHFB EF G IK51LL T FVEH F D501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t06 CB_burial_14_72 110203040A 2 1DA B EB E D B DB AE FD B DED E BDA D F D B D B E DFG F E F D A51LL T FVE501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t06 alpha3 2 1110203040H 3 2 1B S H S EA G B S B A B EHS B G S E51LL T FVEA E50MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t06 bys4 3 2 1110203040H 4 3 2 1G T PY EP EP T PE Y EHPT E51LL T FVEH50MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t06 dssp-ehl22 110203040H 2 1EEHE51LL T FVE501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t06 n_notor23 2 1110203040N 3 2 1HN I N B N BA BG N BN B NHNB G AB51LL T FVE50MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t06 n_sep3 2 1110203040D 3 2 1HDADG D ADHDA51LL T FVE50MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t06 near-backbone-112 110203040A D I E 2 1F IGG I EG AE GI JG D A D J G B G H AG DG I E G H DGI HJ K H J I D51LL T FVE501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t06 o_notor23 2 1110203040H 3 2 1MNBAG NA NB N HNB51LL T FVEN50MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t06 o_sep3 2 1110203040H 3 2 1BDAG DP AG DHDA51LL T FVED50MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t06 pb5 4 3 2 110203040M 5 4 3 2 1N O P ADE H I A F B DF DMB E H D51LL T FVE501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t06 str24 3 2 1110203040Z H 4 3 2 1TSY AY TY Z E ZY HTTA51LL T FVE50MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2311
PAE2311.t06 w0.52 110203040H 2 1S G T V EAB AEE BE D E G HS G VB P51LL T FVEB E501MT V ERELW KWLEVAKRSGRRGWVLIKE G KI V GV F E ER K D A IM A A K EP G L Y
UCSC - PAE - 2387
PAE2387 dssp-ehl22 1110203040H 2 1H5160708090E 2 1EHHE101110120130140H 2 1EHH151160170180190E 2 1EH201210KT A LENLR QGQGKVTP200AS T YGAYA VAPTVQIPPIYVAVFRNDT S YV V YE P F
UCSC - PAE - 2387
# BLASTP 2.2.17 [Aug-26-2007]# Query: PAE2387 # Database: /projects/compbio/data/pdb/dunbrack-pdbaa# Fields: Query id, Subject id, % identity, alignment length, mismatches, gap openings, q. start, q. end, s. start, s. end, e-value, bit scorePAE23
UCSC - PAE - 2387
PAE2387.t04 CB8-sep93 2 1110203040E 3 2 1GI H GFE D EA FAEAE AEAE AFA E G5160708090E 3 2 1K H J HDE H I KHF E FAF E A E G B A F E A D F D E G H J I K H101110120130140G H G
UCSC - PAE - 2387
PAE2387.t04 CB_burial_14_72 1110203040A 2 1F GF GF E F E ADAD B D F D B D E B AD BEBF5160708090D 2 1F E F D E B A B A B E F GFD BE AB DFE FE D A B D A B F E FG F101110120130140
UCSC - PAE - 2387
PAE2387.t04 alpha2 1110203040H 2 1B S HB S B HBB HS E H5160708090E 2 1A B D S D I GEA EHB HS EB101110120130140H 2 1B S EB HS E A B E H151160170180190B S E 2 1BE B SB
UCSC - PAE - 2387
PAE2387.t04 bys3 2 1110203040H 3 2 1GHE P H EP H P G P H5160708090Y E 3 2 1P H G T P G Y EY E HG T E101110120130140P H 3 2 1G T EP HY EP H151160170180190G T H E 3 2 1PH E P E
UCSC - PAE - 2387
PAE2387.t04 dssp-ehl22 1110203040H 2 1H5160708090E 2 1EHHHE101110120130140H 2 1HEH151160170180190E 2 1EH201210KT A LENLR QGQGKVTP200AS T YGAYA VAPTVQIPPIYVAVFRNDT S YV V
UCSC - PAE - 2387
PAE2387.t04 n_notor23 2 1110203040N 3 2 1HN HNB NS N H5160708090N 3 2 1H NBNPNG NHN I N PN P101110120130140N 3 2 1S HNHN B NH151160170180190N 3 2 1P B P BNA
UCSC - PAE - 2387
PAE2387.t04 n_sep3 2 1110203040D 3 2 1HDHDH5160708090A 3 2 1DADDDHDA101110120130140D 3 2 1HDG DHG ADDH151160170180190D 3 2 1ADAD A DDH201D H D
UCSC - PAE - 2387
PAE2387.t04 near-backbone-112 1110203040G 2 1I JI JK G I G IJ GIDGDA G D A GA B AD GH ID I5160708090G D K E K E I D 2 1AD G IJI H GD I D G A B G A D J GG JI JG J D A I G J H J I101
UCSC - PAE - 2387
PAE2387.t04 o_notor23 2 1110203040N 3 2 1HMH NHMH M N H N5160708090B N 3 2 1B PNHNPN101110120130140H 3 2 1MGNHNB NHM151160170180190N 3 2 1P B PB NBNH
UCSC - PAE - 2387
PAE2387.t04 o_sep4 3 2 1110203040D 4 3 2 1HB HD B D H BG DHBH B D H D5160708090A D A D 4 3 2 1ADHB HDAB101110120130140D 4 3 2 1B D HBG DHDHB151160170180190D 4
UCSC - PAE - 2387
PAE2387.t04 pb4 3 2 1110203040M 4 3 2 1KMN O P AM DF DFMKM5160708090D 4 3 2 1E A J A B DFMN O P AD101110120130140M 4 3 2 1MN O P AF KMN MD F KM151160170180190N
UCSC - PAE - 2387
PAE2387.t04 str24 3 2 1110203040H 4 3 2 1TTSTH5160708090Q A 4 3 2 1Z T SSPQHTH T HTQ P Q101110120130140T 4 3 2 1S HTHHH151160170180190T 4 3 2 1Q M P ASAY Z
UCSC - PAE - 2387
PAE2387.t04 w0.52 1110203040S 2 1HSHG T SVS G V S GVS HS5160708090H S H 2 1Q E D VS PQH S HS HS HST R PQ101110120130140E S 2 1HGU VS HS E S V SH151160170180
UCSC - PAE - 2387
PAE2387.t06 CB8-sep93 2 1110203040E 3 2 1F GHG H FGE FA FAFAE AE G D F EAE AFA E F5160708090G E K H 3 2 1E F DE H I KI K H F E F AE AFA GB G E AFE F G K JH101110120130
UCSC - PAE - 2387
PAE2387.t06 CB_burial_14_72 1110203040A 2 1D F GFD FDF EB E D AD E D B DB AB DEE5160708090D 2 1FD E BD BE FG FDE AD E BF E B E FEBD BEF G101110120130140F 2 1DE
UCSC - PAE - 2387
PAE2387.t06 alpha2 1110203040H 2 1S EHS HS BH E BHBH5160708090B E 2 1H SS D EA EE HG S EB101110120130140H 2 1B S EB HS HE H151160170180190B S E 2 1BE B E BED
UCSC - PAE - 2387
PAE2387.t06 bys4 3 2 1110203040H 4 3 2 1EHGP HPH EP E HD H5160708090E Y E 4 3 2 1Y P S P G T EY HG HG T EP101110120130140H 4 3 2 1G HG T P EHY E P E G H151160170180190
UCSC - PAE - 2387
PAE2387.t06 dssp-ehl22 1110203040H 2 1H5160708090E 2 1EHHHE101110120130140H 2 1HH EH151160170180190E 2 1EH201210KT A LENLR QGQGKVTPE200AS T YGAYA VAPTVQIPPIYVAVFRNDT S
UCSC - PAE - 2387
PAE2387.t06 n_notor23 2 1110203040N 3 2 1S HN HG NS H5160708090N P B N 3 2 1BPB NG H NS HN G N P101110120130140N 3 2 1S HNHNH151160170180190N 3 2 1PBNB A BN B N
UCSC - PAE - 2387
PAE2387.t06 n_sep3 2 1110203040D 3 2 1H A HDG HG DA D A D A DH5160708090A D A 3 2 1DADHDHDA101110120130140D 3 2 1HD G DG H DA DH151160170180190D 3 2 1ADAD
UCSC - PAE - 2387
PAE2387.t06 near-backbone-112 1110203040A E G H J 2 1IJG I G JGJ G D A IB D G A GD A GBAD GID J5160708090F 2 1H D K D I D ABG IJH D G D J D G A GA D I GG J EIF K DI G J G J I101
UCSC - PAE - 2387
PAE2387.t06 o_notor24 3 2 1110203040H 4 3 2 1M HN M HMG NHMH M N5160708090P N 4 3 2 1B AB A B NHM HNPN101110120130140M 4 3 2 1HM NHN M NHMH151160170180190N 4 3
UCSC - PAE - 2387
PAE2387.t06 o_sep3 2 1110203040D 3 2 1HB HD HBG DHBH DH D5160708090A 3 2 1DAH B H DHB HDA101110120130140D 3 2 1B D HBDHDHB151160170180190D 3 2 1ADA
UCSC - PAE - 2387
PAE2387.t06 pb4 3 2 1110203040M 4 3 2 1MP AM BF DDM B F KM5160708090N 4 3 2 1DE H J A B DF K MO P A D101110120130140K 4 3 2 1MN O P AF KMF B DM151160170180190N O P A 4
UCSC - PAE - 2387
PAE2387.t06 str24 3 2 1110203040H 4 3 2 1TH5160708090A 4 3 2 1TST S PH G HH THTZ A101110120130140T H 4 3 2 1HTHG HTH151160170180190T 4 3 2 1GQ ATSAY Z YH
UCSC - PAE - 2387
PAE2387.t06 w0.52 1110203040S H 2 1S HS G T SVS U VS U VS H5160708090G E 2 1E D ES VE Q B PQH SH S G V S HGQ PQ101110120130140S 2 1HS G T S VS HE S E S E S H1511601701
UCSC - PAE - 3509
PAE3509 dssp-ehl22 110203040H 2 1EEH51607080H90RI I AAIYM YAPYWEYLIPVAFFTAALL P KG G RK R R RK K P A FN R D V VT V501MF G LIALT VIAVITALALRRVRDRVLT G LA I AG L I LL S V P AL L V N GD V V E
UCSC - PAE - 3509
PAE3509.t04 CB8-sep91110203040E G 1F G F GFE A FAG D A E G AE F E G FGF GH G F EF G D51607080E GFG F G F E A E G AF A EGF EG E A90RI I AAIYM YAPYWEYLIPVAFFTAALL P KG G RK R R RK K P A FN R D
UCSC - PAE - 3509
PAE3509.t04 CB_burial_14_72 110203040A 2 1FGFDF D B D FD F GFDFD51607080FG FGFGFG FD F E B A90RI I AAIYM YAPYWEYLIPVAFFTAALL P KG G RK R R RK K P A FN R D V VT VD A D A501MF G LIALT VI
UCSC - PAE - 3509
PAE3509.t04 alpha2 110203040H 2 1AE A B EA F D S H51607080HB SE H EBE B E I E90RI I AAIYM YAPYWEYLIPVAFFTAALL P KG G RK R R RK K P A FN R D V VT V501MF G LIALT VIAVITALALRRVRDRVLT G LA I AG L I LL S V P AL