4 Pages

MCDB151_HW2_key

Course: MCDB 151, Fall 2009
School: UCSB
Rating:
 
 
 
 
 

Word Count: 1169

Document Preview

151/251 MCDB - HOMEWORK #2 Due Friday 10/16/09 in Lecture 1) A cell containing only Na+ channels and K+ channels has the following intracellular and extracellular ionic composition: Name____________________ Section_____________ Ion: K+ Na+ ClExtracellular Concentration: 10 mM 130 mM 150 mM Intracellular Concentration: 120 mM 20 mM 120 mM a) What are the equilibrium potentials for K+, Na+, and Cl-? (3 pts) Use...

Register Now

Unformatted Document Excerpt

Coursehero >> California >> UCSB >> MCDB 151

Course Hero has millions of student submitted documents similar to the one
below including study guides, practice problems, reference materials, practice exams, textbook help and tutor support.

Course Hero has millions of student submitted documents similar to the one below including study guides, practice problems, reference materials, practice exams, textbook help and tutor support.
151/251 MCDB - HOMEWORK #2 Due Friday 10/16/09 in Lecture 1) A cell containing only Na+ channels and K+ channels has the following intracellular and extracellular ionic composition: Name____________________ Section_____________ Ion: K+ Na+ ClExtracellular Concentration: 10 mM 130 mM 150 mM Intracellular Concentration: 120 mM 20 mM 120 mM a) What are the equilibrium potentials for K+, Na+, and Cl-? (3 pts) Use the Nernst equation: Eequil. = 58 log10 [ion]out [ion]in Z ENa = 58 log (130/20) = +47 mV EK = 58 log (10/120) = -63 mV ECl = (58/-1) log (150/120) = -6 mV b) At what potential will the Na current through open Na channels be zero? (1 pt) When voltage = equilibrium potential for sodium = +47 mV (it would only be 0mV if the extracellular and intracellular concentrations were equal) c) You perform voltage clamp experiments on this cell by holding the membrane potential at -90 mV, then the currents from the whole cell are recorded for voltage pulses to -20 mV, +20 mV and +60 mV (voltage pulses are indicated below). Draw the currents that you would expect from this cell. Label your currents corresponding to each of the voltage pulses (-20, +20 and +60 mV). (6 pts) How do you do problem 1C? First, ask which channels are present in a cell. You are told that only Na and K channels are in this cell. No blockers have been added, so you should expect both voltage-activated Na currents and voltage-activated K currents. Remember that Na currents are fast. They activate fast, then inactivate. K currents are slower: the K currents activate, but do no inactivate. You know that the Na and K currents each will be described by the equation: I = G (V-Eequil) It is easiest to separately figure out the Na and K currents, then to draw them summed together. You will need to calculate the equilibrium potential for each ion (Remember that you already did this in part 1a above). Eequil = RT log10 [ion]out ZF [ion]in ENa = 58 log (130/20) = +47 mV EK = 58 log (10/120) = -63 mV Then you need to know the driving force (V-Eequil) to know whether the currents will be inward or outward. You will also need to estimate G, which is proportional to the probability that the channel is open. In other words, is the channel open or closed at the test voltage. It is easiest to fill in a table like the one shown below: Test voltage Na currents K currents Driving force = (V ENa) Channel open? Yes, fast Yes, fast Yes, fast Driving force = (V EK) Channel open? Yes, slow Yes, slow Yes, slow + 60 mV + 20 mV - 20 mV +60 (47) = +13, outward +20 (47) = -27, inward -20 (47) = -67, inward +60-(-63)=+123, outward +20-(-63)=+83, outward -20-(-63)= +43, outward So, for the -20 mV test voltage, you will expect a fast inward Na current that activates, then inactivates, followed by an outward K current. For the +20 mV test voltage, you expect a fast inward Na current, followed by a slow outward K current. The outward K current amplitude will be bigger than the K current from the -20 mV test voltage because the driving force is larger. For the + 60 mV test voltage, you expect a fast outward Na current followed by a slow outward K current. The K current amplitude will be bigger than for the K current from the +20 mV test voltage because the driving force is larger. d) The cell above is now treated with tetraethylammonium, and the experiment is repeated. For this TEAtreated cell, currents are measured for voltage pulses to -20, +20 and +60 mV. (1 pt each) i) What type of channel will carry current in this experiment? ii) Which test potential(s), if any, will give outward currents? ____ Na channel_________ _______+60 mV___________ + 3) The neuron of a flamencajaminfopper, which contains only voltage-activated I- channels (that slowly open upon depolarization), voltage-activated Cs+ (that channels rapidly open upon depolarization), and background I- channels, is studied electrophysiologically at room temperature. The neuron has the following intracellular and extracellular ionic composition: Ion: ICs+ Rb+ Extracellular concentratrion: 250 mM 10000 mM 20 mM Intracellular concentration: 10 mM 100 mM 200 mM You place an electrode in the cell. What resting potential do you expect? What action potential peak do you expect? (2 pts) Use the Nernst equation: Eequil. = 58 log10 [ion]out [ion]in Z EI- = (58/-1)log 250/10 = -81 mV ECs+ = 58 log 10000/100 = 116 mV ERb+ = 58 log 20/200 = -58 mV The background (resting) channels are I- channels (see description above) so you would expect the resting membrane potential to be -81 mV (based on EI-). The channels that open rapidly upon depolarization are Cs+ channels, so the action potential peak would be close to +116 mV (based on ECs+) 4) Starting with the initiation of a signal on the postsynaptic membrane, name and briefly describe the four stages of neuronal electrical signaling that result in transmitting the signal to the next neuron in the neuronal network. (2 pts) 1) Initiation of signal--receptor potential from a sensory cells or synaptic input from a presynaptic neuron; the signal is graded and local; EPSPs and IPSPs 2) Signal integration--the passive signals are carried through the dendrites and cell body, decreasing in amplitude at greater distances, then sum at the axon hillock; temporal and spatial summation 3) Action Potential--Active Signal is generated at axon hillock if the summed stimulus is more positive than threshold; action potential travels long distance due to saltatory conduction; maintains amplitude due to regeneration at the node of Ranvier. 4) Synaptic Signaling--At the synaptic terminal, calcium influx through voltage-gated Ca channels, causes release of neurotransmitter; neurotransmitter traverses the synaptic cleft and stimulates or inhibits the next neuron 5) In 1906, Camillo Golgi and Santiago Ramn y Cajal shared the Noble Prize for their pioneering work in neuroscience. Describe each scientist's theory on the organization of the nervous system. Who was eventually proven correct and what was the definitive piece of evidence in support of their theory? (3 pts) Cajal Cell Theory / Neuron Doctrine The nervous system, like every other tissue in the body, is made up of discrete cellular units. Golgi Reticular Theory The nervous system is made up of a meshwork of cells that are connected via their cytoplasm, acting together as a single unit. Cajal was eventually proven correct, the definitive piece of evidence was the ability to see the synapse using the electron microscope, proving that individual neurons were separated from each other. 6) In their 2008 opinion piece, Jeff Lichtman and Joshua Sanes champion for developing a field of neuroscience known as connectomics. In what organism would the mapping of a connectome be considered complete? Identify and explain one major challenge to establishing the connectome of complex nervous systems. (3 pts) The first (and thus far only) organism to have its entire connectome mapped was Caenorhabditis elegans, a nematode, by Sydney Brenner and colleagues. Lichtman and Sanes list three major challenges to mapping the connectome of complex nervous systems: 1) Dimensionality the connectome must be done in three dimensions unlike the single dimension of the genome. 2) Variablity while major features of the nervous system are found in every animal of the same species, the fine details of many neurons, and therefore their connections, can vary tremendously between different individuals, even genetically identical ones. 3) Stability The nervous system, unlike the genome, is changing throughout an individual's life.
Find millions of documents on Course Hero - Study Guides, Lecture Notes, Reference Materials, Practice Exams and more. Course Hero has millions of course specific materials providing students with the best way to expand their education.

Below is a small sample set of documents:

UCSB - MCDB - 151
MCDB 151/251 - HOMEWORK #2 Due Friday 10/16/09 in LectureName_ Section_ Ion: K+ Na+ ClExtracellular Concentration: 10 mM 130 mM 150 mM Intracellular Concentration: 120 mM 20 mM 120 mM1) A cell containing only Na+ channels and K+ channels has the followi
UCSB - MCDB - 151
UCSB - CS - 138
CMPSC 138: Fall 2009 Assignment 3 Date Assigned: October 15, 2009 Date Due: October 26, 2009 (in the CS 138 homework box by 4:30 pm) 1. Problems 16 (a) and 17(b) from Section 3.1 of the text. 2. Problem 1, 9, 10 (a) from Section 3.2 of the text. 3. Proble
UCSB - CS - 138
CMPSC 138: Fall 2009 Assignment 2 Date Assigned: October 8, 2009 Date Due: October 16, 2009 by 4:30 PM (in the CS 138 homework box) 1. Problems 10(a), 12, 13, 14 of Section 2.2, page 55 of text. 2. Problems 3, 9, 15 of Section 2.3, pages 62-63 of text.1
UCSB - CS - 138
CMPSC 138: Fall 2009 Assignment 1 Date Assigned: September 30, 2009 Date Due: October 9, 2009 by 4:30 PM (in the CS 138 homework box) 1. Show that (1 + . + n)2 = 13 + . + n3 for all n 1. 2. Show that the number of subsets of a set of n elements is 2n for
UCSB - MCDB - 101B
MCDB 101B Final exam 4:00-7:00 PM Friday Sept 1 Comprehensive but weighted to last 3rd of course (~50%) ~11-12 questions Bring multiple colors (except red) and simple calculator Please participate in the class photo at 3:45 PM outside LSB 1001CoE In14
UCSB - MCDB - 101B
MCDB 101B Study Guide Summer 2009Basic Mendelian Genetics Law of Segregation Monohybrid cross Law of Independent Assortment Dihybrid cross Product and Sum Rules of Probabilities Dominant vs. Recessive Alleles Pedigree Analysis application of mendelian ru
UCSB - MCDB - 101B
321Chpt 14 (pg. 489-508) - Chromosomal Mutations Rearrangements changes in the order and/or location of genes on a chromosome Deletion Duplication Inversion TranslocationCoE InTable 14.1322CoE In132314.1Comparing Mouse and Human Genomes170 c
UCSB - MCDB - 101B
283The Direct Detection of Genotype Distinguishes Individual Genomes (Chpt. 11) Four classes of DNA variation for direct detection of genotype Protocols used to determination of allelic DNA polymorphisms. Positional cloning Linkage mapping LOD scores
UCSB - MCDB - 101B
233Molecular Tools for Genome Analysis (Chapter 9)Review material from 101ARestriction enzymes to cut DNA Gels to separate DNA/RNA by size Probes and hybridization to specifically detect complementary sequences Southern blots PCR to amplify miniscule a
UCSB - MCDB - 101B
CoE InCoE In1CoE InIn corn, Zea mays, mutant genes for anther ear (an) and fine stripe (f) are carried at linked loci separated by approximately 20 map units. These mutant genes are recessive to their counterpart alleles, an+ and f+, which control
UCSB - MCDB - 101B
CoE InCoE In1CoE InCoE In2Spring 2009CoE InSpring 2009CoE In3Spring 2009CoE In3-33CoE In4Co101 E InCo102 E In5
UCSB - MCDB - 101B
MCDB 101B Midterm 1 Study Guide Chapter 2 Primary Concepts Gene Alleles Homozygous Heterozygous Genotype Phenotype Dominant Recessive P, F1, & F2 generations test cross True-breeding Law of Segregation Law of Independent Assortment Monohybrid 3:1, 1:1, 1:
UCSB - MCDB - 101B
MCDB 101B Study Guide for Midterm 2 Summer 2009 Chromosome Structure (Chapter 13) Euchromatin and heterochromatin Nucleosomes Histones H2A,H2B, H3, H4, H1 H1 special histone not part of core. Higher packing levels of chromatin packaging 30 nm solenoid, ra
UCSB - MCDB - 101B
188Mechanism of Recombination (Chpt. 6 pg 191-200)movieCoE InAnalysis of Meiotic Products in Fungi suggests a mechanism for Recombination and Gene Conversion Fungi have ascospore which contains all the haploid products of a single meiosis. Dissection
UCSB - MCDB - 101B
157Linkage, Recombination, and the Mapping of Genes on Chromosomes (chpt 5) Linkage and meiotic recombination Genes linked together on the same chromosome usually assort together Linked genes may become separated through recombination Mapping The freq
UCSB - MCDB - 101B
133Chromosomes (Chpt. 13) Chromatin DNA, histone proteins, nonhistone proteins Single DNA strand per chromatid Histones 5 basic proteins Nonhistones heterogeneous collection of 1000s of different proteins Nucleosome fundamental unit of chromosomal pac
UCSB - MCDB - 101B
94Chromosome Theory of Inheritance (Chpt 4) Chromosomes contain genetic material Mitosis ensures each cell carries the same chromosomes Meiosis produces haploid germ cells Genetic determination of Sex Inheritance of Sex-linked traitCoE InOpener95
UCSB - MCDB - 101B
52Chapter 3 - Extensions to Mendelian Genetics Beyond simple dominant and recessive interactions Multiple Alleles Gene Interaction Multiple genes determining one phenotypeCoE In533.2Dominance is not always completeCoE In1543.3CoE In553.4a
UCSB - MCDB - 101B
MCDB 101B Molecular Genetics II: Eukaryotes Instructor: Rolf E. Christoffersen Office: Bio II, rm 3125 Office Hours: TR 11:00-12:00 or by appointment. e-mail: christof@lifesci.ucsb.edu Phone:805-893-35991Teaching Assistant: Giang Gong Office Hours: W
UCSB - MCDB - 101A
MCDB 101A Summer 2008 Exam 3 7/31/08 (100 points total)Name_Key_ Perm #_Circle the best answer for each of the multiple choice questions (3 points each) 1. Which of the following processes requires RecA? a. Formation of a cointegrant during replicative
UCSB - MCDB - 101A
MCDB 101A Summer 2008 Exam 3 7/31/08 (100 points total)Name _ Perm #_Circle the best answer for each of the multiple choice questions (3 points each) 1. Which of the following processes requires RecA? a. Formation of a cointegrant during replicative tra
UCSB - MCDB - 101A
MCDB 101A Summer 2008 Exam 2 7/21/08 (100 points total)Name_Key_ Perm #_Circle the best answer for each of the multiple choice questions (3 points each) 1. Which of the following evidence supports the Holliday model? a. Mismatches that are generated as
UCSB - MCDB - 101A
MCDB 101A Summer 2008 Exam 2 7/21/08 (100 points total)Name_ Perm #_Circle the best answer for each of the multiple choice questions (3 points each) 1. Which of the following evidence supports the Holliday model? a. Mismatches that are generated as a co
UCSB - MCDB - 101A
MCDB 101A M2008 Exam 1 Name_Key_ 7/7/08 (100 points total) Perm #_ Multiple Choice: Circle the letter corresponding to the best answer (3 points for each correct answer) 1. A mutant organism that requires the amino acid tryptophan in order to grow is know
UCSB - MCDB - 101A
MCDB 101A M2008 Exam 1 Name_ 7/7/08 (100 points total) Perm #_ Multiple Choice: Circle the letter corresponding to the best answer (3 points for each correct answer) 1. A mutant organism that requires the amino acid tryptophan in order to grow is known as
UCSB - MCDB - 101A
MCDB 101A Summer 2009 2nd Midterm 7/20/09 (100 points total)Name_Key_ Perm #_Multiple Choice: Circle the letter corresponding to the best answer (3 points for each correct answer) 1. Which is true of RecA protein? No answer was correct: 3 free points! a
UCSB - MCDB - 101A
MCDB 101A S09 Midterm 1 7/6/09 (100 points total)Name_Key_ Perm #_Multiple Choice: Circle the letter corresponding to the best answer (3 points for each correct answer) 1. If a DNA molecule consists of 20% A, 30% T and 20% G, which of the following is c
UCSB - MCDB - 101A
MCDB 101A Final Exam July 31, 2009 200 points totalName_KEY_ Perm#_Choose the best answer to each of the following multiple choice questions (3 points each) 1. The Chi sequence is GCTGGTGG. What is the probability of finding this exact series of nucleot
UCSB - MCDB - 101A
Transcriptional Regulation Regulation of Gene ExpressionTranscriptional inhibition/enhancement mRNA degradation/stabilization Translational inhibition/enhancement Protein degradation/stabilization Inhibition/stimulation of protein function12Lactose
UCSB - MCDB - 101A
mRNATranscription and Translation Colinear with gene sequence Codes for one or more proteins One DNA strand serves as coding strand for a given mRNA (has same sequence as mRNA) Other strand is template strand (has a sequence complementary to that of the
UCSB - MCDB - 101A
DNA Replication"It has not escaped our notice that the specific pairing we have postulated immediately suggests a possible copying mechanism for the genetic material"-Watson and Crick1DNA Replication ModelsFig 3.12Meselson and Stahl Experiment Gro
UCSB - MCDB - 101A
DNA: The Genetic MaterialGriffith and Bacterial Transformation Streptococcus pneumoniae polysaccharide capsule = virulence factor S-strain (encapsulated)-lethal to mice R-strain-nonpathogenic12The Griffith Mixed Culture ExperimentNature of the Trans
UCSB - MCDB - 101A
Clicker QuizzesMolecular Genetics of ProkaryotesIntroduction12Prokaryotes vs. Eukaryotes What is Genetics? Griffiths ".the study of genes" Snyder "The manipulation of DNA to study cellular and organismal functions" Russell "[a study of]. the biologi
American College of Gastroenterology - BUS - 500
Cash Outflow Working Cap. Oper. Exp. Overhaul Cost Savings Salvage Value Cash Flows Discount 10% PV Amount Sum of PV NPVBeg. End Yr. 1 Yr. 1 (300,000) (30,000) (60,000) 135,000 (330,000) 1 (330,000) 374322 $44,322 75,000 0.91 68175End Yr. 2End Yr. 3En
Rider - ACC - 310
Conceptual Framework Underlying Financial Accounting2-1CHAPTER 2CONCEPTUAL FRAMEWORK UNDERLYING FINANCIAL ACCOUNTINGTRUE-FALSE-ConceptualAnswerF T F T F T F T T F F F T T F F T T F FNo.1. 2. 3. 4 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18.
Rider - ACC - 310
CHAPTER 3THE ACCOUNTING INFORMATION SYSTEMTRUE/FALSEAnswerF T F F T T F T F TNo.1. 2. 3. 4. 5. 6. 7. 8. 9. 10.DescriptionRecording transactions. Nominal accounts. Liability and stockholders' equity accounts. Steps in accounting cycle. General jour
VCU - ACCT - 204
When manufacturing overhead is applied to production, it is added to: (Points: 6) the Cost of Goods Sold account the Raw Materials account the Work in Process account the Finished Goods inventory account I CHOSE WIP ACCOUNT. I BELIEVE THAT IS CORRECT? The
University of Florida - GLY - GLY 1102
Sacral vertebrae are those of the hip region The three main bones of the hindlimb are the femur, tarsals, and tibia: False Cervical vertebrae are those of the neck, located between the head and the back The metatarsals are the bones between tarsals and
Princeton - VIS - 262
IMPORTANT SAFETY INSTRUCTIONSIn these safety instructions the word productrefers to the Canon Digital Video CamcorderOPTURA60/OPTURA50 A and all itsaccessories.EIntroduction1. Read Instructions All the safety andoperating instructions should be re
Princeton - PHI - 205
PHIL/CLA 205: Introduction to Ancient Philosophy Handout for Lecture 1 1. Some key dates for ancient philosophy 625 B.C. Educated guess as to when (approximately) Thales of Miletus was born 585 Thales successfully predicts an eclipse of the sun 540-480 Pr
Princeton - PHI - 205
PHI/CLA 205: Introduction to Ancient Philosophy Handout for Class 7: AtomismHendrik Lorenz(1) Melissus, KRS 534 And nothing of it is empty. For what is empty is nothing. Well, what is empty could not very well exist. Nor does it move. For it cannot give
Princeton - PHI - 205
PHI/CLA 205: Introduction to Ancient Philosophy Handout for Class 3 Parmenides (1) KRS 291, fr. 2 Come now, and I will tell you (and you must carry my account away with you when you have heard it) the only ways of inquiry that are to be thought of. The on
Princeton - PHI - 205
PHIL/CLA 205: Introduction to Ancient Philosophy Class 2Hendrik Lorenz(1) Heraclitus, son of Bloson (or, according to some, of Herakon), of Ephesus. This man was at his prime in the 69th Olympiad. He grew up to be exceptionally haughty and supercilious,
Princeton - POL - 320
Strategic Defiance and Compliance in the U.S. Courts of Appeals *Chad Westerland, Jeffrey Segal, Lee Epstein, Charles Cameron, and Scott Comparato * Abstract Why do lower courts treat Supreme Court precedents favorably or unfavorably? To address this que
Princeton - POL - 320
Hierarchical and Collegial Politics on the U.S. Courts of AppealsJonathan P. Kastellec Department of Politics Princeton University jkastell@princeton.edu July 10, 2009Abstract This paper argues that hierarchical politics in the federal judiciary shape c
Princeton - POL - 320
October 17, 2007AMERICAN EXCEPTIONLifers as Teenagers, Now Seeking Second ChanceBy ADAM LIPTAKAmerican Exception Without Parole This is the first in an occasional series of articles that will examine commonplace aspects of the American justice system
Princeton - POL - 320
THE SUPREME COURT 2004 TERM FOREWORD: A POLITICAL COURTRichard A. PosnerTABLE OF CONTENTSI. WHAT THE STATISTICS SHOW .35 II. POLITICAL JUDGING .39 A. A Constitutional Court Is a Political Court .39 B. Aggressive Versus Modest Approaches to Political Ju
Princeton - POL - 320
FIELD ESSAY=WhatJudgesWant:Judges'Goals and Judicial BehaviorSTE UNIVERSITY LAWRENCE BAUM,OHIOPoliticalscientists in the field of judicial politics' devote the largestportion of their collective effort to the explanation of judicial behavior.They
Princeton - POL - 320
COLUMBIA LAWVOL. XXXV JUNE, 1935REVIEWNO. 6TRANSCENDENTAL NONSENSE AND THE FUNCTIONAL APPROACHI. THE HEAVEN OF LEGAL CONCEPTSSome fifty years ago a great German jurist had a curious dream. He dreamed that he died and was taken to a special heaven re
Princeton - POL - 320
HeinOnline - 3 Vand. L. Rev. 395 1949-1950HeinOnline - 3 Vand. L. Rev. 396 1949-1950HeinOnline - 3 Vand. L. Rev. 397 1949-1950HeinOnline - 3 Vand. L. Rev. 398 1949-1950HeinOnline - 3 Vand. L. Rev. 399 1949-1950HeinOnline - 3 Vand. L. Rev. 400 1949-19
Princeton - POL - 320
Economic History AssociationConstitutions and Commitment: The Evolution of Institutional Governing Public Choice in Seventeenth-Century England Author(s): Douglass C. North and Barry R. Weingast Source: The Journal of Economic History, Vol. 49, No. 4 (De
Princeton - POL - 320
OCTOBER TERM, 1989 Syllabus 496 U. S.PENNSYLVANIA v. MUNIZCERTIORARI TO THE SUPERIOR COURT OF PENNSYLVANIA No. 89-213. Argued February 27, 1990-Decided June 18, 1990Respondent Muniz was arrested for driving while under the influence of alcohol on a Pen
Princeton - SLA - 338
Princeton - SLA - 338
Princeton - SLA - 338