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increase REPORTS fivefold in recombination (Fig. 3C). This elevated recombination was only slightly reduced by CR. Finally, we observed a highly significant negative correlation between life span and rDNA recombination rate (fig. S3). Although these data do not exclude the possibility that CR may mediate yeast life span independently of its effects on the rDNA, these data provide strong evidence that CR extends...

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increase REPORTS fivefold in recombination (Fig. 3C). This elevated recombination was only slightly reduced by CR. Finally, we observed a highly significant negative correlation between life span and rDNA recombination rate (fig. S3). Although these data do not exclude the possibility that CR may mediate yeast life span independently of its effects on the rDNA, these data provide strong evidence that CR extends life span by suppressing rDNA recombination irrespective of whether SIR2 is present or absent. They also demonstrate that in a sir2D fob1D strain, Hst2 is critical for maintaining rDNA stability. Although the deletion of HST2 blocked the ability of CR to extend life span in the sir2D fob1D strain, it was formally possible that this was caused by toxic levels of ERCs in the strain, precluding alternative CR pathways from taking effect. Therefore, we determined whether HST2 could increase life span when overexpressed in order to test whether HST2 is a bona fide longevity gene (9). Consistent with the ability of HST2 to increase rDNA silencing and decrease rDNA recombination (Fig. 1 and fig. S1), overexpression of HST2 in W303AR5 sir2D fob1D extended life span to the same extent as CR in this strain background (Fig. 4A), as well as in a wild-type strain (fig. S4). No additive effect of HST2 overexpression and CR was observed, indicating that HST2 and CR extend life span of sir2D fob1D mutants through the same pathway (28). Next, we investigated whether the residual life-span extension seen for the hxk2D mutant (a mimic of intense CR) lacking SIR2 and HST2 (Fig. 2C) was due to the activity of another sirtuin. As previously reported (16), deletion of HST1 markedly increased rDNA recombination in a wild-type strain (Fig. 4B). Although deleting HST3 and HST4 together has been shown to decrease chromosomal stability and increase mitotic recombination (29), we did not observe increased rDNA recombination in a W303AR5 hst3D hst4D strain, although recombination in an hst4D single mutant is about twice as high as that in the wild type. Because deletion of HST1 had the greatest effect on rDNA recombination, we suspected that Hst1 might be the factor responsible for the residual life-span extension. This hypothesis was consistent with our finding that the general sirtuin inhibitor NAM completely blocked the life-span extension of a sir2D fob1D strain by hxk2D (Fig. 1D) and a recent report that Hst1 functions in the nucleus with Hst2 in gene silencing (23). Whereas deletion of either HST3 or HST4 in this strain did not affect the ability of hxk2D to extend life span (fig. S5), deletion of HST1 completely eliminated the residual life-span extension provided by hxk2D in the BY4742 sir2D fob1D hst2D strain (Fig. 4C). In a previous study, the life span of a sir2D fob1D hst1D strain was extended by CR (19), leading the authors to conclude that HST1 plays no role in CR. Indeed, in agreement with this finding, we find that CR is effective in suppressing recombination of such a mutant (Fig. 4D). However, this study implies that HST2 underlies the CR-mediated life-span extension of this strain and that HST1 plays a minor role that is observed only in the absence of SIR2 and HST2. Our results show that HST2 is responsible for Sir2-independent life-span extension by CR and that it does so by suppressing rDNA recombination, the same mechanism by which SIR2 extends life span. These findings highlight the importance of genomic stability as a determinant of yeast life span and raise the likelihood that multiple members of the sirtuin family in higher organisms also play critical roles in maintaining genomic stability and possibly in extending life span during times of adversity. References and Notes 1. A. A. Falcon, J. P. Aris, J. Biol. Chem. 278, 41607 (2003). 2. D. A. Sinclair, L. Guarente, Cell 91, 1033 (1997). 3. T. Kobayashi, D. J. Heck, M. Nomura, T. Horiuchi, Genes Dev. 12, 3821 (1998). 4. P. A. Defossez et al., Mol. Cell 3, 447 (1999). 5. J. S. Smith et al., Proc. Natl. Acad. Sci. U.S.A. 97, 6658 (2000). 6. S. Imai, C. M. Armstrong, M. Kaeberlein, L. Guarente, Nature 403, 795 (2000). 7. K. G. Tanner, J. Landry, R. Sternglanz, J. M. Denu, Proc. Natl. Acad. Sci. U.S.A. 97, 14178 (2000). 8. J. C. Tanny, D. Moazed, Proc. Natl. Acad. Sci. U.S.A. 98, 415 (2001). 9. M. Kaeberlein, M. McVey, L. Guarente, Genes Dev. 13, 2570 (1999). 10. E. J. Masoro, Exp. Gerontol. 35, 299 (2000). 11. S. J. Lin, P. A. Defossez, L. Guarente, Science 289, 2126 (2000). 12. R. M. Anderson, K. J. Bitterman, J. G. Wood, O. Medvedik, D. A. Sinclair, Nature 423, 181 (2003). 13. S. J. Lin et al., Nature 418, 344 (2002). 14. B. Rogina, S. L. Helfand, Proc. Natl. Acad. Sci. U.S.A. 101, 15998 (2004). 15. J. G. Wood et al., Nature 430, 686 (2004). 16. S. Perrod et al., EMBO J. 20, 197 (2001). 17. K. Houthoofd, B. P. Braeckman, T. E. Johnson, J. R. Vanfleteren, Exp. Gerontol. 38, 947 (2003). 18. J. C. Jiang, J. Wawryn, H. M. Shantha Kumara, S. M. Jazwinski, Exp. Gerontol. 37, 1023 (2002). 19. M. Kaeberlein, K. T. Kirkland, S. Fields, B. K. Kennedy, PLoS Biol. 2, E296 (2004). 20. D. A. Sinclair, J. Wood, data not shown. 21. M. Kaeberlein, K. T. Kirkland, S. Fields, B. K. Kennedy, Mech. Ageing Dev. 126, 491 (2005). 22. B. K. Kennedy, N. R. Austriaco Jr., J. Zhang, L. Guarente, Cell 80, 485 (1995). 23. A. Halme, S. Bumgarner, C. Styles, G. R. Fink, Cell 116, 405 (2004). 24. S. M. Gasser, M. M. Cockell, Gene 279, 1 (2001). 25. K. J. Bitterman, R. M. Anderson, H. Y. Cohen, M. Latorre-Esteves, D. A. Sinclair, J. Biol. Chem. 277, 45099 (2002). 26. J. Landry, J. T. Slama, R. Sternglanz, Biochem. Biophys. Res. Commun. 278, 685 (2000). 27. C. M. Gallo, D. L. Smith Jr., J. S. Smith, Mol. Cell. Biol. 24, 1301 (2004). 28. D. W. Lamming et al., data not shown. 29. C. B. Brachmann et al., Genes Dev. 9, 2888 (1995). 30. K. T. Howitz et al., Nature 425, 191 (2003). 31. M. S. Longtine et al., Yeast 14, 953 (1998). 32. A. L. Goldstein, J. H. McCusker, Yeast 15, 1541 (1999). 33. We thank members of the Lin and Sinclair labs for valuable insights and J. Wood for critical reading of the manuscript. This work was supported by the National Institute of General Medical Sciences, the National Institute on Aging, the Harvard-Armenise Foundation, and The Paul F. Glenn Laboratories for the Biological Mechanisms of Aging at Harvard. S.-J.L. and D.A.S. are Ellison Medical Research Foundation New Research Scholars. D.W.L. is supported by a National Eye Institute training grant. D.A.S. is a cofounder and board member of, and has equity in, Sirtris Pharmaceuticals, a company whose goal is to discover sirtuin-modulating drugs. Supporting Online Material www.sciencemag.org/cgi/content/full/1113611/DC1 Materials and Methods Figs. S1 to S5 References and Notes 15 April 2005; accepted 8 July 2005 Published online 28 July 2005; 10.1126/science.1113611 Include this information when citing this paper. Structure of SARS Coronavirus Spike Receptor-Binding Domain Complexed with Receptor Fang Li,1 Wenhui Li,3 Michael Farzan,3 Stephen C. Harrison1,2* The spike protein (S) of SARS coronavirus (SARS-CoV) attaches the virus to its cellular receptor, angiotensin-converting enzyme 2 (ACE2). A defined receptorbinding domain (RBD) on S mediates this interaction. The crystal structure at 2.9 angstrom resolution of the RBD bound with the peptidase domain of human ACE2 shows that the RBD presents a gently concave surface, which cradles the N-terminal lobe of the peptidase. The atomic details at the interface between the two proteins clarify the importance of residue changes that facilitate efficient cross-species infection and human-to-human transmission. The structure of the RBD suggests ways to make truncated disulfide-stabilized RBD variants for use in the design of coronavirus vaccines. The SARS coronavirus (SARS-CoV) is the agent of severe acute respiratory syndrome, which emerged as a serious epidemic in 2002 to 2003, with over 8,000 infected cases and a SCIENCE fatality rate of 10% (14). Coronaviruses, which are large, enveloped, positive-strand RNA viruses, infect a variety of mammalian and avian species and can cause upper res- 1864 16 SEPTEMBER 2005 VOL 309 www.sciencemag.org REPORTS Fig. 1. The SARS-CoV spike protein RBD. (A) Domain structure of the SARS-CoV spike protein. The boundaries of the RBD were determined by protease digestion followed by N-terminal sequencing and mass spectrometric analysis of the digestion products (33). The RBM was identified from the crystal structure of RBD in complex with the human receptor. The fusion peptide (FP) and the two heptad repeat regions (HR-N and HR-C) of S2 have been identified by studies using synthetic peptides (34, 35). The transmembrane anchor and intracellular tail have assigned from sequence characteristics. (B) Crystal structure of the RBD (core structure in cyan and RBM in red) in complex of the human receptor ACE2 (green). (C) Detail of the binding interface, with side chains of three residues (Leu472, Asn479, and Thr487 from left to right) critical for cross-species and human-to-human transmission of SARS-CoV. (D) Sequence and secondary structures of the RBD. Helices are drawn as cylinders, and strands are drawn as arrows. The RBM is in red; the remainder of the RBD is in cyan. Disordered regions are shown as dashed lines (36). piratory, gastrointestinal, and central nervous system diseases (5). The large spike protein (S) on the virion surface mediates both cell attachment and membrane fusion (5). In the case of several avian and mammalian coronaviruses, S is cleaved by furin or a related protease into S1 and S2; the former bears the receptor attachment site; the latter, the fusion activity. The structures of refolded heptadrepeat fragments of S2 from the mouse hepatitis coronavirus (MHV) and from SARS-CoV (68) confirm earlier predictions (4) that the postfusion conformation has the trimer-ofhairpins organization characteristic of Bclass 1[ fusion proteins, such as those of HIV, influen1 Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School and Laboratory of Molecular Medicine, and 2Howard Hughes Medical Institute, Children's Hospital, 320 Longwood Avenue, Boston, MA 02115, USA. 3Department of Microbiology and Molecular Genetics, Harvard Medical School, New England Primate Research Center, Southborough, MA 01772, USA. *To whom correspondence should be addressed. E-mail: harrison@crystal.harvard.edu za virus, and Ebola virus (9). S on mature SARS-CoV virions does not appear to be cleaved, and the sequence that aligns with the MHV cleavage site lacks the essential residues for furin susceptibility (3, 4, 10, 11). We therefore refer to the S1 and S2 Bregions[ (12), which contain 666 and 583 amino acid residues, respectively (Fig. 1A). Coronaviruses exploit a wide variety of cellular receptors (5). SARS-CoV and another human coronavirus, HCoV-NL63, both use as their receptor a cell-surface zinc peptidase, angiotensin-converting enzyme 2 (ACE2) (13, 14). The crystal structure of the ACE2 ectodomain (15) shows a claw-like N-terminal peptidase domain, with the active site at the base of a deep groove, and a C-terminal Bcollectrin[ domain. A fragment of the S1 region, residues 318 to 510, is sufficient for tight binding to the peptidase domain of ACE2 (11, 16, 17). This fragment, the receptorbinding domain (RBD), is the critical determinant of virus-receptor interaction and thus of viral host range and tropism (18). SARS-CoV isolated from patients during the 20022003 SCIENCE VOL 309 epidemic, and also from milder sporadic cases in 2003 to 2004, appears to derive from a nearly identical virus circulating in palm civets and raccoon dogs (19, 20). Changes in just a few residues in the RBD can lead to efficient cross-species transmission (18, 20). The RBD also includes important viral-neutralizing epitopes (2123), and it may be sufficient to raise a protective antibody response in inoculated animals. We expressed the SARS-CoV spike protein RBD, residues 306 to 575, in Sf9 cells and purified the fragment (24). Brief treatment with chymotrypsin yielded a shorter fragment, residues 306 to 527. Soluble ACE2, residues 19 to 615, was expressed in Sf9 cells and purified as described in (24). The two components were mixed, and the complex was purified by size-exclusion chromatography on Superdex 200 (Amersham Biosciences, Piscataway, NJ). Crystals in space group P 21, a 0 82.3 ), b 0 119.4 ), c 0 113.2 ), b 0 91.2-, with two complexes per asymmetric unit, were grown at room temperature from a mother liquor containing 24% polyethylene glycol 6000, www.sciencemag.org 16 SEPTEMBER 2005 1865 REPORTS 150 mM NaCl, 100 mM Tris at pH 8.2, and 10% ethylene glycol. We determined the structure of the ACE2/SARS-CoV/RBD complex by molecular replacement with ACE2 as the search model, and we refined it at 2.9 ) resolution (24). The final model contains residues 19 to 615 of the N-terminal peptidase domain of human ACE2 and residues 323 to 502 (except for 376 to 381) of the RBD; as well as glycans N-linked to ACE2 residues 53, 90, 322, and 546 and to RBD residue 330; and 65 solvent molecules. The Rfree is 27.5% and Rwork is 22.1% (see table S1 for definitions). The ACE2 peptidase domain has two lobes that close toward each other after substrate engagement (15). In one of the two complexes in the asymmetric unit of our crystals, ACE2 is fully open; in the other, it is slightly closed (fig. S1). The SARS-CoV S protein contacts the tip of one lobe of ACE2 (Fig. 1). It does not contact the other lobe, nor does it occlude the peptidase active site. Binding of the spike protein to ACE2 is not altered by the addition of a specific ACE2 inhibitor, which is expected to favor the closed state (18). Thus, both structural and biochemical data indicate that viral attachment is unaffected by the opento-closed transition. The RBD contains two subdomains (Fig. 1): a core and an extended loop. The core is a five-stranded anti-parallel b sheet (b1 to b4 and b7), with three short connecting a helices (aA to aC). There are nine cysteines in the chymotryptic fragment. Disulfide bonds connect cysteines 323 to 348, 366 to 419, and 467 to 474. The remaining cysteines are disordered but two (378 and 511) are in the same neighborhood and could form a disulfide in the recombinant fragment, even if they have other partners in the intact S protein. The extended loop subdomain lies at one edge of the core; it presents a gently concave outer surface formed by a two-stranded b sheet (b5 and b6). The base of this concavity cradles the N-terminal helix of ACE2; a ridge to one side of it, which is reinforced by the Cys467Cys474 disulfide bridge, contacts the loops between ACE2 helices a2 and a3; a ridge to the other side inserts between a short ACE2 helix (residues 329 to 333) and a b hairpin at ACE2 residue 353 (Fig. 1C). Residues 445 to 460 of the RBD anchor the entire receptor-binding loop to the core of the RBD. We refer to this loop (residues 424 to 494), which makes all the contacts with ACE2, as the receptorbinding motif (RBM). The RBM surface is complementary to the receptor tip, with about 1700 )2 of buried surface at the interface (Fig. 2A and fig. S2), consistent with their high affinity (dissociation constant Kd 10j8) (18, 21). A total of 18 residues of the receptor contact 14 residues of the viral spike protein (Table 1). Networks of hydrophilic interactions, which occur largely among amino acid side chains, predominate. Fig. 2. Features contributing to specific recognition of ACE2 by the SARS-CoV RBD. (A) Surface complementarity, Space-filling representation of ACE2 (in green), RBD (core structure in cyan and RBM in red), and the complex of ACE2 and RBD are shown. The complex buries 1700 A2 at the binding interface. (B) Distribution of tyrosines (magenta) and cysteines (yellow) on the RBD. The RBM is particularly tyrosine-rich. The six tyrosines that contact ACE2 are accompanied by an asterisk. The three disulfide bonds link C323 to C348, C366 to C419, and C467 to C474; two are labeled, and the third is partly concealed by the lower corner of the b sheet. Fig. 3. Residues important for species specificities of SARS-CoV. (A) Met82 of human ACE2 is asparagine in rat ACE2, introducing a glycan that appears to interfere with infection of rat cells. (B) Asn479 (boldface) is present in most SARS-CoV sequences from human specimens. Lys479, which is found in most sequences from palm-civet specimens, would have steric and electrostatic interference from residues (e.g., His34) on the N-terminal helix of human ACE2. (C) Thr487 (boldface) appears to enhance human-to-human transmission of SARS-CoV. The methyl group of Thr487 lies in a hydrophobic pocket at the ACE2/RBD interface. On rat and mouse ACE2, residue 353 is histidine, disfavoring viral binding. The dashed black lines indicate hydrogen bonds. Six RBM residues at this interface are tyrosines, which present both a polar hydroxyl group and a hydrophobic aromatic ring (Fig. 2B). Coronaviruses are classified in three groups (5); SARS-CoV belongs to group 2 (fig. S3). Spike-protein sequences from several members of group 2 lead us to expect that all have rather similar structures, including the RBD core (fig. S3). The SARS-CoV RBM substantially is shorter than are the corresponding regions in several other group-2 viral spike proteins, however, and it has no evident sequence similarity to the others (fig. S3). Thus, this extended loop is probably a hypervariable decoration of an otherwise-conserved domain. In the case of MHV, the receptor (murine carcinoembryonic antigen cell adhesion molecule 1a, or CEACAM1a) (25, 26) makes contact not with the extended-loop subdomain (nor, indeed, with any part of the domain homologous to the SARS-CoV RBD), but rather with structures in the N-terminal region of the spike protein (27). Receptors and receptor-binding regions SCIENCE of other group-2 coronaviruses have not been identified. The group-1 human coronavirus 229E receptor is aminopeptidase N; the corresponding RBD on its spike protein is known (28). The SARS-CoV appears to derive from a cross-species infection with a coronavirus isolated from palm civets (19, 20). S-gene sequences from civet and human specimens obtained during the 2002-to-2003 epidemic show that their RBDs differ at only four positions, residues 344, 360, 479, and 487, but the human viral spike protein binds the human receptor 103 to 104 times more tightly than does its civet spike counterpart (18). Residues 344 and 360 are far from the binding interface in the complex described here, and mutation to the corresponding civet CoV residues does not affect affinity or infectivity (18). The critical changes are therefore at positions 479 and 487, both of which lie in the RBD-receptor contact (Figs. 1 and 3 and Table 1). 1866 16 SEPTEMBER 2005 VOL 309 www.sciencemag.org REPORTS Table 1. Contacts between ACE2 and SARS-CoV RBD. Residues in ACE2 that contact the RBD are listed by their position (numbers across the top of each column) and by their single-letter identity (36) in the palm-civet, mouse, rat, 24 27 31 34 37 38 41 L T T Y Q E Y N T N Q E D Y K S K Q E D Y Q T K H E D Y N473 Y475 Y475 Y440 Y491 Y436 Y484 Y442 N479 T486 T487 and human receptors. The residues they contact in the structure described here and their position numbers in the spike proteins from human isolates are shown at the bottom of each column. 42 45 79 82 83 90 325 329 330 353 354 Q V L T Y D Q E N K G Q L T S F T Q A N H G Q L I N F N P T N H G Q L L M Y N Q E N K G Y436 Y484 L472 L472 N473 T402 R426 R426 T486 G488 Y491 Y484 Y475 T487 G488 Y491 civet ACE2 mouse ACE2 rat ACE2 human ACE2 human SARS The changes at these two positions are relatively subtle. In most viral sequences from palm-civet specimens, residue 479 is lysine and 487 is serine, whereas in SARS-CoV sequences from the 20022003 epidemic, these residues are asparagine and threonine, respectively. The presence of lysine at 479 reduces affinity for human but not for civet ACE2; serine at 487 reduces affinity for both receptors (18). Position 479 lies opposite the ACE2 N-terminal helix (a1), on which several residues differ in identity between civet and human (Table 1). Some civet coronavirus sequences have asparagine at position 479, and the difference does not appear to be critical for binding to the civet receptor (18). At position 487 in the spike protein, replacing threonine (SARS-CoV) with serine (civet viral sequences) would remove the threonine methyl group, which lies in a hydrophobic pocket bounded by atoms in the side chains of Tyr41 and Lys353 on the receptor and Tyr 484 in the RBM (Fig. 3C). This pocket appears to be relatively inflexible. A main-chain hydrogen bond (carbonyl of ACE2 Lys353 to amide of RBD Gly 488) fixes the relative positions of receptor and spike protein quite precisely. Moreover, the Thr 487 rotamer is determined by a hydrogen bond from Og to the main-chain carbonyl of Tyr 484; the aliphatic part of the Lys353 side chain is sandwiched between the rings of ACE2 Tyr41 and RBD Tyr491, and the e-NH is neutralized by ACE2 Asp38. 3 Mutation to serine would thus leave a hard-tofill van der Waals hole; indeed, a mutation in which Thr 487 is replaced by Ser in the human RBD decreases affinity for human ACE2 by more than 20-fold (18). Civet ACE2 is essentially identical to human ACE2 at all the relevant positions in the vicinity of this interaction; like the human receptor, it appears to bind RBDs with threonine at 487 more tightly than those with serine (18). All of the more than 100 S-protein sequences obtained during the 20022003 SARS epidemic have threonine at this position, whereas all 14 such sequences from palm-civet and raccoon-dog isolates have serine (29, 30). Viruses from sporadic SARS cases during 2003 to 2004, each of which was an independent cross-species event from which no human-to-human transmission occurred, all had asparagine at 479 and serine at 487 (29, 30). It is therefore plausible that a key factor determining severity (and possibly human-to-human transmission) is the presence or absence of a g-methyl group on the 487 side chain. The 20032004 sequences differed, however, at two other RBD positions from those sequences obtained during the epidemic of the previous winter: Leu472 had changed to proline and Asp480 to glycine. Inspection of the model suggests that the leucine-to-proline change might have contributed to attenuation, by reducing the spike-receptor contact surface (Fig. 3A). A similar rationale is harder to find for the aspartate-to-glycine substitution, because the aspartyl side chain projects into solution, and mutation of this residue to alanine has no effect on RBD binding to ACE2 (16). Two other species differences are worth noting. Rat ACE2 does not support infection by SARS-CoV, and mouse ACE2 does so only inefficiently (30). At position 82, where the human receptor has a methionine, the rat protein has a glycosylated asparagine; the glycan would disrupt by steric interference a hydrophobic contact between Met82 and Leu472 in the RBM (Fig. 3A). At position 353, where the human receptor has a lysine critical for the contact with Thr 487 in the RBM (Fig. 3B), the rat receptor has histidine. Mouse ACE2 also has histine at 353, but it does not have a glycosylation site at 82. It thus bears one but not both of the differences that render rat ACE2 inactive as a receptor, and mutation of His353 to lysine in mouse ACE2 allows high-level infection of murine cells by SARSCoV (30). The residues singled out for description in the preceding paragraphs are not, of course, the only ones critical for the tight complementarity of the SARS-CoV RBD and human (or palm civet) ACE2. They are simply the positions at which there are differences among isolates and receptors important for binding and entry. Other species might in principle harbor variants of the same virus that would require changes at different positions to be able to infect human cells, and other changes in the civet virus might permit cross-species infection even in the absence of the serine-to-threonine mutation at position 487. The structure might SCIENCE VOL 309 allow one to recognize such changes in future animal isolates. For example, the human receptor (but not the civet receptor) bears an N-linked glycan at position 90. Mutation of Asn90 to eliminate the glycan enhances S-proteinmediated binding and infection of human cells by pseudotyped lentiviruses (18). The glycan faces a loop in the RBD containing residues 399 to 412. Changes in this loop that reduce likely interference with the glycan might have the same enhancing effects as does elimination of the glycan on the receptor or mutation of Ser487 to threonine on the S protein. Neutralizing antibodies against SARS-CoV recognize epitopes in the RBD (2123). For example, a high-affinity recombinant human monoclonal antibody, 80R, which is sensitive to mutation within the RBM, inhibits viral entry by blocking association of virus and receptor (21, 31). The soluble SARS-CoV RBD is therefore of potential use as an immunogen (23, 32). In the structure described here, the interface of the RBD with the receptor is very well defined, but the opposite face of the RBD is more disordered. The latter surface would interact with the rest of the spike protein, and it indeed contains the N and C termini of the RBD fragment as well as the disordered loop, residues 376 and 381. Thus, this face of the protein could be modified in various ways in the molecular engineering of a candidate vaccine. The loop from 376 to 381 could probably be shortened and the disordered cysteines removed; other disulfides could be introduced to add stability; and the C-terminal segment could be used to link the RBD to an oligomeric core. Of the 23 glycosylation sites on S, three are in the RBD. Only one (Asn330) is sufficiently ordered in our structure to show even a single sugar, and all are well separated from the RBM. Glycosylation is therefore unlikely to interfere with potential neutralizing epitopes within the RBD; introduction of new glycosylation sites could in principle Bfocus[ the antigenicity of a candidate immunogen. References and Notes 1. T. G. Ksiazek et al., N. Engl. J. Med. 348, 1953 (2003). 2. J. S. Peiris et al., Lancet 361, 1319 (2003). 3. M. A. Marra et al., Science 300, 1399 (2003). 4. P. A. Rota et al., Science 300, 1394 (2003). www.sciencemag.org 16 SEPTEMBER 2005 1867 REPORTS 5. M. M. C. Lai, K. V. Holmes, in Fields' Virology, D. M. Knipe, P. M. Howley, Eds. (Lippincott. Williams. and Wilkins, Philadelphia, PA, 2001). 6. Y. Xu et al., J. Biol. Chem. 279, 49414 (2004). 7. Y. Xu et al., J. Biol. Chem. 279, 30514 (2004). 8. V. M. Supekar et al., Proc. Natl. Acad. Sci. U.S.A. 101, 17958 (2004). 9. W. Weissenhorn et al., Mol. Membr. Biol. 16, 3 (1999). 10. M. J. Moore et al., J. Virol. 78, 10628 (2004). 11. X. Xiao, S. Chakraborti, A. S. Dimitrov, K. Gramatikoff, D. S. Dimitrov, Biochem. Biophys. Res. Commun. 312, 1159 (2003). 12. T. M. Gallagher, M. J. Buchmeier, Virology 279, 371 (2001). 13. W. Li et al., Nature 426, 450 (2003). 14. H. Hofmann et al., Proc. Natl. Acad. Sci. U.S.A. 102, 7988 (2005). 15. P. Towler et al., J. Biol. Chem. 279, 17996 (2004). 16. S. K. Wong, W. Li, M. J. Moore, H. Choe, M. Farzan, J. Biol. Chem. 279, 3197 (2004). 17. G. J. Babcock, D. J. Esshaki, W. D. Thomas Jr., D. M. Ambrosino, J. Virol. 78, 4552 (2004). 18. W. Li et al., EMBO J. 24, 1634 (2005). 19. Y. Guan et al., Science 302, 276 (2003). 20. H. D. Song et al., Proc. Natl. Acad. Sci. U.S.A. 102, 2430 (2005). 21. J...

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Ph 2984 Experiment 2: Atomic SpectraBackground Reading: Krane, pp. 185-189 Apparatus: Spectrometer, sodium lamp, hydrogen lamp, mercury lamp, diffraction grating, watchmaker eyeglass, small flashlight. Prelab Questions: 1. What would be the diffraction a
Alabama - CH - 237
Bridgewater College - CHEM - 161
Dr. OverwayPRACTICE EXAM IICHEM 161-01October, 2003Instructions: Do not open this test booklet until you are instructed to do so. Show your work in order to receive partial credit. Keep track of units and use the correct significant figures. The follo
Bridgewater College - CHEM - 161
Dr. OverwayPRACTICE EXAM IIICHEM 161Instructions: Do not open this test booklet until you are instructed to do so. Show your work in order to receive partial credit. Keep track of units and use the correct significant figures. The following information
Bridgewater College - CHEM - 161
Dr. OverwayPRACTICE EXAM IIICHEM 161Instructions: Do not open this test booklet until you are instructed to do so. Show your work in order to receive partial credit. Keep track of units and use the correct significant figures. The following information
Bridgewater College - CHEM - 161
steric # = 4 orbital shape = tetrahedron hybridization = sp3 lone pairs = 0 molecular shape = tetrahedron bond angles = 109.5 degrees structure is non polar
Bridgewater College - CHEM - 161
Dr. OverwayPRACTICE EXAM IICHEM 161-01October, 2003Instructions: Do not open this test booklet until you are instructed to do so. Show your work in order to receive partial credit. Keep track of units and use the correct significant figures. The follo
Bridgewater College - CHEM - 162
PRACTICE EXAM IIDr. Overway CHEM 162-01 March 2005 Show your work in order to receive partial credit. Keep track of units and use the correct significant figures. The following information may be useful during the exam.-Gorxn = RT ln Keq pKa = -log KaK
Mich Tech - PDFS - 0910
2009-2010 Verification WorksheetU.S. Department of EducationDependentFORM APPROVED OMB NO. 1845-0041Federal Student Aid ProgramsYour application was selected for review in a process called "Verification." In this process, your school will be comparin
Lake County - CI - 332
Metalesson 1 I have to admit that I was a little nervous about this class when I realized that it was a continuation of C & I 331. Some of the concepts that were covered were difficult for me to understand, and I think I studied for Art Baroody's final ha
Lake County - CI - 332
Katie Herrmann Metalesson 4 September 29, 2004 The Population Workshop was a really good learning experience for me. Although I knew that our world population is over 6 billion people, the activities that we did made me gain a better understanding of just
University of Illinois, Urbana Champaign - ECE - 329
TL terminated by arbitrary loadI(0)Zg+V (0)FlV (0) ZL = I(0)0normalized load impedance: load reflection coefficient:ZL = rL + jxL zL Z0V - (0) zL - 1 ZL - Z0 L (d = 0) = + = = V (0) ZL + Z0 zL + 1TL terminated by arbitrary loadI(d)Zg+V (d)
University of Illinois, Urbana Champaign - ECE - 420
UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN Department of Electrical and Computer Engineering ECE420: Digital Signal Processing Laboratory Fall 2008 Lecture: 165 Everitt Laboratory, Lab: 251 EL Credit: 2 hours or 1/2 unit http:/courses.ece.uiuc.edu/ece420/
University of Illinois, Urbana Champaign - PHYS - 496
Online Scientific Resources and Performing Scientific Literature SearchesLance CooperThe place to start!http:/www.library.uiuc.edu/phx/Where to download published scientific papers: How:Go to Physics Library: http:/www.library.uiuc.edu/phx/ Select "E
University of Illinois, Urbana Champaign - PHYS - 498
NEWS & VIEWSNATURE|Vol 442|17 August 2006system with well-characterized qubits; the ability to determine the initial values of those qubits; long-lived, coherent qubit states; the ability to measure single qubits; and a universal set of quantum operatio
University of Illinois, Urbana Champaign - PHYS - 513
Topics in Quantum Optics and Quantum InformationUniversity of Illinois at Urbana-Champaignby Man Hong, Yunglast updated 22 January 2007Problem Set #1 Question 1 (a) In passing through a (lossless) 50/50 beam splitter, light will be split into two equa
Washington - BIOL - 356
North Texas - ELET - 5320
S O N E T S t a n d a r dSONET Telecommunications Standard PrimerP r i m e rSONET Telecommunications StandardPrimerWhat is SONET?This document provides an introduction to the Synchronous Optical NETwork (SONET) standard. Standards in the telecommuni
Maryland - HW - 796
Google Query 1: gardening wet soil conditions Rank Title 1 Royal Horticultural Society - Gardening Advice: Trees for Wet Soils 2 Improving Soils For Vegetable Gardening, HYG-1602-92 3 BBC - Gardening - Basics - Wet weather 4 DuluthStreams - water gardens
Montana - CS - 445
(Version 3.03, Oct 2, 1999)by Mark OvermarsDepartment of Computer Science Utrecht University P.O. Box 80.089, 3508 TB Utrecht the NetherlandsPrefaceThe Lego MindStorms and CyberMaster robots are wonderful new toys from which a wide variety of robots c
Montana - CS - 445
DIAPM RTAI Programming Guide 1.0disclaimerLineo, Inc. makes no representations or warranties with respect to the contents or use of this manual, and specifically disclaims any express or implied warranties of merchantability or fitness for any particula
Montana - CS - 445
DIAPM-RTAIDipartimento di Ingegneria Aerospaziale, Politecnico di Milano Real Time Application Interface (for Linux)A Hard Real Time support for LINUXThis document explains how to call the functions available in DIAPM-RTAIThe RTAI distribution (www.ae
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 21: Topological SortObjectivesIn this section you will: Learn about topological sort In college, before taking a particular course, students usually must take all applicabl
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 22: Standard Template Library (STL)ObjectivesIn this chapter you will: Learn about the Standard Template Library (STL) Become familiar with the basic components of the STL:
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 21: GraphsObjectivesIn this chapter you will: Learn about graphs Become familiar with the basic terminology of graph theory Discover how to represent graphs in computer memo
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 20: AVL TreesObjectivesIn this section you will: Learn about AVL treesAVL TreesDefinition: A perfectly balanced binary tree is a binary tree such that: i. The heights of t
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 20: Binary TreesObjectivesIn this chapter you will: Learn about binary trees Explore various binary tree traversal algorithms Learn how to organize data in a binary search t
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 19: Heap SortObjectivesIn this section you will: Learn about the heap sort algorithmsA heap is a list in which each element contains a key, such that the key in the element
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 19: Searching and Sorting AlgorithmsObjectivesIn this chapter you will: Learn the various search algorithms Explore how to implement the sequential and binary search algorit
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 17: Linked ListsVideo List This program requires us to- Maintain a list of all videos in the store - Add a new video to our list Use a linked list to create a list of vide
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 18: Stacks and QueuesObjectivesIn this chapter you will: Learn about stacks Examine various stack operations Learn how to implement a stack as an array Learn how to implemen
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 17: Linked Lists Doubly linked list: every node has next and back pointers Can be traversed in either directionDoubly Linked Lists (continued) Operations: 1. Initialize th
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 17: Linked ListsObjectivesIn this chapter you will: Learn about linked lists Become aware of the basic properties of linked lists Explore the insertion and deletion operatio
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 16: Recursion Let us determine how long it would take to move all 64 disks from needle 1 to needle 3. If needle 1 contains 3 disks, then the number of moves required to move
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 16: RecursionObjectivesIn this chapter you will: Learn about recursive definitions Explore the base case and the general case of a recursive definition Discover what is a re
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 15: Exception HandlingObjectivesIn this chapter you will: Learn what an exception is Learn how to handle exceptions within a program See how a try/catch block is used to han
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 13: Pointers, Classes, Virtual Functions, Abstract Classes, and ListsObjectivesIn this chapter you will: Learn about the pointer data type and pointer variables Explore how
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 14: Overloading and TemplatesObjectivesIn this chapter you will: Learn about overloading Become aware of the restrictions on operator overloading Examine the pointer this Le
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 12: Inheritance and CompositionObjectivesIn this chapter you will: Learn about inheritance Learn about derived and base classes Explore how to redefine the member functions
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 11: Classes and Data AbstractionObjectivesIn this chapter you will: Learn about classes Learn about private, protected, and public members of a class Explore how classes are
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 10: Records (structs)ObjectivesIn this chapter you will: Learn about records (structs) Examine various operations on a struct Explore ways to manipulate data using a struct
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 9: Arrays and StringsObjectivesIn this chapter you will: Learn about arrays Explore how to declare and manipulate data into arrays Understand the meaning of "array index out
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 8: User-Defined Simple Data Types, Namespaces, and the string TypeObjectivesIn this chapter you will: Learn how to create and manipulate your own simple data typecalled the
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 7: User-Defined Functions IIObjectivesIn this chapter you will: Learn how to construct and use void functions in a program Discover the difference between value and referenc
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 5: Control Structures II (Repetition)ObjectivesIn this chapter you will: Learn about repetition (looping) control structures Explore how to construct and use countcontrolled
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 6: User-Defined Functions IObjectivesIn this chapter you will: Learn about standard (predefined) functions and discover how to use them in a program Learn about user-defined
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 3: Input/OutputObjectivesIn this chapter you will: Learn what a stream is and examine input and output streams Explore how to read data from the standard input device Learn
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 2: Basic Elements of C+ObjectivesIn this chapter you will: Become familiar with the basic components of a C+ program, including functions, special symbols, and identifiers E
University of Louisiana at Lafayette - WLE - 2581
C+ Programming: Program Design Including Data Structures, Third EditionChapter 1: An Overview of Computers and Programming LanguagesObjectivesIn this chapter you will: Learn about different types of computers Explore the hardware and software component
University of Louisiana at Lafayette - WLE - 2581
Chapter 1 Intro to Computing A) History of Computing 1.1 pg 3 - 9 B) Structure of the Modern Computer 1.2 pg 10 - 14 C) Pgm Design - 1.3 & 1.4 pg 16 - 34 A) History of Computing 3000 - 4000 - China abacus 1600s - slide rule 1642 - Blaise Pascal, French Ma
Allan Hancock College - CS - 5248
Adaptive Filters for Continuous Queries over Distributed Data StreamsChris Olston, Jing Jiang, and Jennifer WidomStanford University cfw_olston, jjiang, widom@cs.stanford.eduAbstractWe consider an environment where distributed data sources continuousl
Yale - CS - 422
Exokernel: An Operating System Architecture for Application-Level Resource ManagementDawson R. Engler, M. Frans Kaashoek, and James OToole Jr. M.I.T. Laboratory for Computer Science Cambridge, MA 02139, U.S.A engler, kaashoek, james @lcs.mit.eduTraditio