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Michigan State University - BS - 111
Chapter 17From Gene to ProteinPowerPoint LecturePresentations forBiologyEighth EditionNeil Campbell and Jane ReeceLectures by Chris Romero, updated by Erin Barley with contributions from Joan SharpCopyright 2008 Pearson Education, Inc., publishing
Michigan State University - BS - 111
DNA SynthesisCh. 16 pp. 305-319Ifyouthinkoursocietyisintrinsicallybad,thereisnodoubtinmymindthatthedoublehelixwillenableittobeworsethanyoucanpossiblyfear.Ifontheotherhandyouarelikeme,andyouareoptimistic,youwillthinkthattheknowledgethatitwillprovid
Michigan State University - BS - 111
Study guide (Kopachik)Cell Structure AnswersQuestions:1. Classify the following cells: mycoplasma, E. coli, cyanobacterium, yeast,fungi, algae, large soil amoebae, plant cell, hepatocyte. Are theyprokaryote or eukaryote, do they have peptidoglycan ce
Michigan State University - BS - 111
Study guide (Kopachik)Cell StructureTerms to know:CytologyMycoplasmaYeastCapsuleGram negative and gram positiveNucleoidNucleolusChromatinDifferential centrifugationNuclear envelope, pores, laminaSmooth endoplasmic reticulumRough endoplasmic
Michigan State University - BS - 111
BS 111 Study Guide Cellular RespirationVocabularyRedox reactionsoxidationreductiondehydrogenasenicotinamide adenine dinucleotide (NAD)flavin adenine dinucleotide (FAD)glycolysisfermentationKrebs cyclepyruvate oxidationpyruvate (pyruvic acid)l
Michigan State University - BS - 111
BS 111 Study GuidePhotosynthesisVocabularyautotrophcarbon fixation reactionsCalvin cycleabsorbtion spectrumchlorophyll aphotosystem IIcarontenoidsNADPnoncyclic pathwayphotophosphorylationferrodoxinfluorescenceporphyrin ringthylakoidrubulo
Michigan State University - BS - 111
Study GuideCell SignalingVocabularyLigandSignal transductionParacrine signalAutocrine signalYeast a and alpha cellsA and peptidesSmall amines (epinephrine)Plant growth regulators (auxin, gibberellic acid)Nitric oxide (NO)G protein-couple recep
Michigan State University - BS - 111
BS 111 (Kopachik)Answers to Cell Cycle II Regulation1. Describe the three checkpoints. Give name, location in cell cycle, purpose.The checkpoint in late G1 called G1 Checkpoint or Start gets input signals forproper nutrients, growth factors and cell s
Michigan State University - BS - 111
BS 111 (Kopachik)Cell Cycle IITerms to know:Cell cycle clockG1checkpointG2 checkpointM checkpointCyclinCyclin-dependent kinase (cdk)MPF (Mitosis-promotion-factor)P27Benign tumorMalignant tumorDensity-dependent inhibitionAnchorage independenc
Michigan State University - BS - 111
BS 111 (Kopachik)Answers to Study Guide for DNA Synthesis1. Why did some biologists believe on theoretical grounds that proteins, not DNA,convey the genetic information?Before the Watson and Crick structure for DNA showed how vast informationcould be
Michigan State University - BS - 111
BS 111 (Kopachik)Study Guide for DNA SynthesisDefine, describe or illustrate the following:Transforming factorStreptococcus smooth and rough phenotypeA. Hershey and M. ChaseT2 bacteriophageConservative, semi-conservative, dispersive replicationUlt
Michigan State University - BS - 111
BS 111Study Guide Transcription and TranslationDefine, describe or illustrate the following terms:PromoterDNA-binding proteinRNA polymerasegenotypePhenotypeauxotrophPrototrophmRNATATA boxpost transcriptional-10 boxtemplatenon-templatezippe
Michigan State University - BS - 111
Answers to BS 111 Study Guide 1 (Kopachik)Lecture 1 and Chapter 3 questions.Fill in the blank space to make a true statement.The basic biochemical pathways of metabolism are the same in _prokaryotic and eukaryotic cells. Even the enantiomers of amino
Michigan State University - BS - 111
Study Guide 1 for lecture 1 Overview - Chemical BondsThe following vocabulary terms were introduced in lecture.Define, describe or illustrate the following vocabulary terms and use the term in context in asentence to make a.enantiomer (optical isomer)
Michigan State University - BS - 111
Answers to Study Guide 2 (Kopachik)Fill in the blank:Carbon has _4_ valence electrons and can form a _tetrahedron_-shaped moleculearound the _asymmetric carbon.Left-handed and right-handed versions of glycine are called _enantiomers_. Geometricisomer
Michigan State University - BS - 111
BS 111 Study Guide 2 (Kopachik)Hydrocarbons/ Functional Groups Ch. 4 pp. 58-66Define, describe or illustrate the following vocabulary terms and use the term incontext in a sentence.TetrahedronhydrocarbonStructural isomerGeometric isomerCis isomer
Michigan State University - BS - 111
Answers to study guide 3 (Kopachik)1. Why are protein polymers so versatile in numbers of proteins and in ability to interactwith other molecules in the cell and so cause physiological changes to occur?Proteins can be made to be different in the number
Michigan State University - BS - 111
Study Guide 3 Proteins/structure (Kopachik)PolymerMonomerCondensation reactionDehydrationHydrolysisPeptidePolypeptideProteinAmino acidAlpha carbonAsymmetric carbonR groupPolar R groupNonpolar R groupElectrically charged R groupMethionineP
Michigan State University - BS - 111
Answers to study guide 4 Proteins/Metabolism (Kopachik)Questions:Some reactions are endergonic whereas others are _exergonic. In comparing the twowith regard to reactants and product chemical bonds and stability we find that theproducts are more stabl
Michigan State University - BS - 111
Study Guide 4 Proteins/Metabolism (Kopachik)Terms to know:First lawSecond lawEnergy (E)Entropy (S)G (delta G)Spontaneous reactionEnthalpy (H)Exergonic reactionEndergonic reactionEquilibrium constant (Keq)Reaction couplingSummary of main point
Michigan State University - BS - 111
Answers to study guide 5 Proteins/ EnzymesQuestions:What determines the reaction rate of an exergonic reaction and how enzymes speed upthe reaction rate?The rate (all reactant and product concentrations, temperature, pressure being heldconstant) is d
Michigan State University - BS - 111
Study Guide 5 Proteins/ Enzymes (Kopachik)Terms to know:EnzymeActivation energy EaCatalystActive siteTransition stateCofactorCoenzymeCompetitive inhibitorNoncompetitive inhibitorAllosteric regulationFeedback regulationcooperativitySummary of
Michigan State University - BS - 111
Answers to Study Guide 6 Nucleic Acids (Kopachik)Questions:There are two forms of bases _pyrimidines with three types (_thymine, cytosine and uracil )andpurine with two types (_adenine and _guanine). Any _base_ plus either of two types of sugars_ribos
Michigan State University - BS - 111
Study Guide 6 Nucleic Acids (Kopachik)Terms to knowPolynucleotideBasePurineAdenineGuaninePyrimidineCytosineThymineUracilNucleosideDeoxyriboseriboseNucleotidePhosphodiester bondDNA (deoxyribonucleic acid)PolarityAntiparallelComplementari
Michigan State University - BS - 111
Answers to Study Guide 7 Carbohydrates (Kopachik)Questions:1. Describe the structure of the monosaccharide glucose by answering thefollowing questions:What is the molecular formula, the functional groups present and the arrangement ofthem to the numb
Michigan State University - BS - 111
Study Guide 7 Carbohydrates (Kopachik)Terms to know:CarbohydrateMonosaccharidePolysaccharideGlycoproteinGlycolipidTriosePentoseHexoseGlycosidic bondalpha bondbeta bondStarchCelluloseGlycogenChitinpeptidoglycanMain points:1. Carbohydrate
Michigan State University - BS - 111
Answers to study guide 8-10 Lipids (Kopachik)Questions:Lipids:1. Describe the structure of a fatty acid. Use the terms hydrocarbon chain, single anddouble bonds, saturated and unsaturated, cis versus trans. How would the meltingtemperature of a fatty
Michigan State University - BS - 111
Study Guides 8-10 Lipids (Kopachik)Terms to know:LipidTriglyceride (triacylglycerol)Fatty acidGlycerolEster bondSaturated fatty acidUnsaturated fatty acidPhospholipidHeadTailAmphipathicMicelleBilayercholesterolFluid mosaicIntegral protein
Michigan State University - BS - 111
Study guide (Kopachik)Cell StructureTerms to know:CytologyMycoplasmaYeastCapsuleGram negative and gram positiveNucleoidNucleolusChromatinDifferential centrifugationNuclear envelope, pores, laminaSmooth endoplasmic reticulumRough endoplasmic
Michigan - ENGR - 101
ENGR 101 Fall 2010 (Section 100)What is ENGR 101?ENGR 101: Intro to Computers andProgrammingEngineering 101 introduces first-year students to theconcept of an algorithm: a well-defined set of instructionsthat achieve a particular goal. Constructing
Michigan - ENGR - 101
ENGR 101 (Sec 100), Fall 2010AnnouncementsOffice hours begin this weekProject 1 is postedIntroduction to C+schedule posted on CTools (exceptions TBA)Due Wednesday 15 Sep at 9pmMake sure you know how to submit your projectExam conflictsNotify Nade
Michigan - ENGR - 101
ENGR 101 (Sec 100), Fall 2010AnnouncementsProject 1 due tonight (Wed 9pm)Look for Project 2 release by thenWarning: Considerably more difficult, time consumingDue Wednesday, 22 Sep at 9pmFunctions and ProceduresENGR 101, Lecture 3: 15 Sep 10Exampl
Michigan - ENGR - 101
File StreamsENGR 101, Lecture 4: 20 Sep 10AnnouncementsProject 2 is due Wednesday night at 9pmMore on the project later in this lecture1StreamsSequences of data made available over timeInput StreamSource of data, accessedincrementallyIn C+, acc
Michigan - ENGR - 101
Iteration and ConditionalsENGR 101, Lecture 5: 22 Sep 10AnnouncementsProject 2 due tonight (Wed 9pm)Exam #1 Tue 5 OctM. Wellmanif you have a potential conflict, contact Nader Jawad(njawad@umich.edu)Classroom evacuation routes1Fundamental Algorit
Michigan - ENGR - 101
ENGR 101, Sec 100, Fall 10SelectionENGR 101, Lecture 6: 27 Sep 10AnnouncementsProject 3 due Wed 9PM (29 Sep)Exam #1 Tue 5 OctM. Wellmanif you have a potential conflict, contact Nader Jawad(njawad@umich.edu) ASAP1ENGR 101, Sec 100, Fall 10Fundam
Michigan - ENGR - 101
ENGR 101 Sec. 100 Fall 10Predicates and LoopsENGR 101, Lecture 7: 29 Sep 10AnnouncementsProject 3 due Wed 9PM (29 Sep)Exam #1 Tue 5 OctProf. M. Wellmansample exams available this weekendtake practice gateway exam for participation creditreview se
Michigan - ENGR - 101
ENGR 101, Sec 100, Fall 10Counting LoopsENGR 101, Lecture 8: 6 Oct 10AnnouncementsM. WellmanProject 4 out, due Wed 13 Oct 9pmExam #1 grades1ENGR 101, Sec 100, Fall 10Finite SumsSuppose we want to compute a summationSum(m) =Sum(4) =Summation F
Michigan - ENGR - 101
ENGR 101Data TypesENGR 101, Lecture 9: 11 Oct 10Today's QuestionHow high can you count on the fingers of one hand?1ENGR 101AnnouncementsProject 4 due Wed 9pmHow is your progress on Project 4?Have not started yetB. Started, not very far yetC. H
Michigan - ENGR - 101
ENGR 101Names: Variable, Scope, LifetimeENGR 101, Lecture 10: 13 Oct 10AnnouncementsProject 4 due tonight, 9pmProject 5 out soon, 2-week (almost) assignment1ENGR 101NamesProgramming entails introduction and management ofnamesfor procedure: func
Michigan - ENGR - 101
ENGR 101Classes and Generic RoutinesENGR 101, Lecture 11: 20 Oct 10AnnouncementsProject 5 due Wed 27 Oct (9pm)Exam 2 on Wed 3 Nov (6pm)contact Nader Jawad (njawad@umich.edu) about conflictsMid-term course evaluationsthanks for constructive feedbac
Michigan - ENGR - 101
ENGR 101String Class, Array SemanticsENGR 101, Lecture 12: 25 Oct 10AnnouncementsProject 5 due Wed 27 Oct (9pm)Exam 2 on Wed 3 Nov (6pm)contact Nader Jawad (njawad@umich.edu) about conflictsHow is your progress on Project 5?A.B.C .D.E.Have no
Michigan - ENGR - 101
ENGR 101, Section 100VectorsENGR 101, Lecture 13: 27 Oct 10AnnouncementsProject 5 due tonight (9pm)Exam 2 on Wed 3 Nov (6pm)M. Wellmancontact Nader Jawad (njawad@umich.edu) about conflictsGateway exam coming (probably in lab)1ENGR 101, Section 1
Michigan - ENGR - 101
ENGR 101, Section 100, Fall 10Recursion and SortingENGR 101, Lecture 14: 1 Nov 10AnnouncementsExam 2 on Wed 3 Nov (6pm)Project 6 due Wed 10 Nov (9pm)M. Wellmanwatch for room announcementsOpen book/notes, same style/rules as Exam 1Samples posted,
Michigan - ENGR - 101
ENGR 101, Section 100Matrix CalculationsENGR 101, Lecture 15: 8 Nov 10Background SurveyA.B.C .D.M. WellmanHow much do you already know about matrix algebra?Good facility with linear algebraSome basic matrix operations (e.g., multiplication)Hav
Michigan - ENGR - 101
ENGR 101, Section 100Gaussian Elimination, andIntro to MATLABENGR 101, Lecture 16: 10 Nov 10AnnouncementsProject 6 due tonight at 9pm1ENGR 101, Section 100Q1: Triangular?Q2: How to solve?Convert to a Matrix-1 1/20 -1/2000010000 -1/20 1/2
Michigan - ENGR - 101
ENGR 101, Section 100, Fall 09Matrices in MATLABENGR 101, Lecture 17: 15 Nov 10AnnouncementsLook for Project 7 this week (due Wed 1 Dec)First MATLAB assignment1ENGR 101, Section 100, Fall 09MATLAB Data Elements (review)all data is some kind of ar
Michigan - ENGR - 101
ENGR 101, Section 100, Fall 10Scripts, Functions, Input/OutputENGR 101, Lecture 18: 17 Nov 10AnnouncementsProject 7 posted (due Wed 1 Dec)My office hoursM. Wellmanmay require some constructs from next week, but you haveenough Matlab to get a good
Michigan - ENGR - 101
ENGR 101 Section 100, Fall 10MATLAB Programming (Part I)ENGR 101, Lecture 19: 22 Nov 10AnnouncementsProject 7 due Wed 1 DecM. WellmanTry to get done early, to avoid MATLAB license contention1ENGR 101 Section 100, Fall 10Save/LoadMATLAB provides
Michigan - ENGR - 101
ENGR 101 Section 100MATLAB Programming (Part II)ENGR 101, Lecture 20: 24 Nov 10AnnouncementsProject 7 due Wed 1 DecM. WellmanTry to get done early, to avoid MATLAB license contention1ENGR 101 Section 100Relational Operators on ArraysRelational o
Michigan - ENGR - 101
ENGR 101, Section 100, Fall 10Subarrays and VectorizationENGR 101, Lecture 21: 29 Nov 10AnnouncementsProject 7 due Wed 1 DecM. WellmanTry to get done early, to avoid MATLAB license contentionNote on conversion to doublesWatch for Project 8 soon1
Michigan - ENGR - 101
ENGR 101, Section 100, Fall 10Visualizing DataENGR 101, Lecture 22: 1 Dec 10AnnouncementsProject 7 due tonight: Wed 1 DecProject 8 out tonight, due Mon 13 DecM. WellmanNo extensions possibleDealing with MATLAB license contention1ENGR 101, Sectio
Michigan - ENGR - 101
ENGR 101, Section 100, Fall 10Fractals and the Mandelbrot SetENGR 101, Lecture 23: 8 Dec 10AnnouncementsProject 8 due Mon 13 DecExam 3 Thu 16 Dec, 810amM. Wellmanopen book & notesno computation or communication devicessimilar format to previous e
Michigan - ENGR - 101
10/3/10 Review: C+ FundamentalsENGR 101: 4 Oct 10Where Weve BeenAlgorithms (what its all about)A high-level programming language: C+Data types and declarationExpression statementsOperators: Arithmetic, Assignment, Input/Output,Relational, Logica
Michigan - ENGR - 101
ENGR 101, Sec,on 100, Fall 10 11/2/10 Review: Programming and C+ENGR 101: 3 Nov 10Where Weve Been Since Exam 1Counting Loopscounting patterns, for, nested loopsData TypesNamesvariables, constants, scope, lifetimeClassesdata types, encodi
Michigan - ENGR - 101
ENGR 101, Sec,on 100, Fall 10 12/12/10 Review: Programming in MATLABENGR 101: 13 Dec 10AnnouncementsProject 8 due tonight 9pmAll regrade requests must be in before Final examExam 3 Thu 16 Dec, 810amTo be graded asapopen book & notesno com
Michigan - ENGR - 101
Exam 2 - AnswersFall 2009 SemesterEngr101: Introduction to Computers and ProgrammingSection 100 / 200You are allowed to use the books, your notes, and a calculator.You cannot use devices that allow the passing of information between others.You canno
Michigan - ENGR - 101
Exam 2Fall 2009Engr101: Introduction to Computers and ProgrammingSection 100 / 200You are allowed to use the books and your notes.You cannot use electronic devices including, but not limited to, calculators, laptops, and cell phones.You cannot acces
Michigan - ENGR - 101
Exam 3 AnswersFall 2009Engr101: Introduction to Computers and ProgrammingSection 100 / 200You are allowed to use the books and your notes.You cannot use electronic devices including, but not limited to, calculators, laptops, and cell phones.You cann
Michigan - ENGR - 101
Exam 3Fall 2009Engr101: Introduction to Computers and ProgrammingSection 100 / 200You are allowed to use the books and your notes.You cannot use electronic devices including, but not limited to, calculators, laptops, and cell phones.You cannot acces
Michigan - ENGR - 101
Exam 2 - AnswersWinter 2010Engr101: Introduction to Computers and ProgrammingSection 200You are allowed to use the books and your notes.You may not use electronic devices: including, but not limited to, calculators, laptops, and cell phones.You may
Michigan - ENGR - 101
Exam 2Winter 2010Engr101: Introduction to Computers and ProgrammingSection 200You are allowed to use the books and your notes.You may not use electronic devices: including, but not limited to, calculators, laptops, and cell phones.You may not access