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Lecture 6 SRR F-2011

Course: BIO 313, Fall 2011
School: Iowa State
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313 Lecture Biology 6 Sept 2, 2011 Madrid, Spain (2011): What is this person doing? Problems (Ch 3 Complete: Edition 4) Concept Checks: 1- 7 Worked Problems: 1-4 Comprehension Questions 1 11 Application Questions /Problems: 13, 14, 16, 17, 20, 22, 24, 25, 27, 28, 30, 31, 34, 38 Vocabulary for Wednesday (Sept 7) Hermaphroditism Monoecious organism Dioecious organism Drosophila Chapter 3 Basic...

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313 Lecture Biology 6 Sept 2, 2011 Madrid, Spain (2011): What is this person doing? Problems (Ch 3 Complete: Edition 4) Concept Checks: 1- 7 Worked Problems: 1-4 Comprehension Questions 1 11 Application Questions /Problems: 13, 14, 16, 17, 20, 22, 24, 25, 27, 28, 30, 31, 34, 38 Vocabulary for Wednesday (Sept 7) Hermaphroditism Monoecious organism Dioecious organism Drosophila Chapter 3 Basic Principles of Heredity 1. Mendel 2. Monohybrid Crosses: Mendels First Law, the Law of Segregation 3. Punnett Square & Probability 4. Dihybrid Crosses: Mendels Second Law, the Law of Independent Assortment 5. Chi-square test Law of Independent Assortment Different genetic factors (alleles) assort randomly into gametes independently from one another (separation occurs at Anaphase I) An example of the 2nd Law from Chapter 2 (Figure 2-17) : random distribution of chromosomes at Anaphase I produces genetic variation m = maternal p = paternal How predict progeny for multiple traits? Branching method: an easier, faster way to predict progeny of crosses than Punnett Square, especially for more than two traits Independent assortment applies so can apply the multiplication rule Branching method for Dihybrid Cross: Phenotype Prediction Consider each gene (chromosome) separately Yy x Yy First trait Second trait Both traits How to work a genetics problem? See p. 59 (Worked Problem) (Good tips) Chapter 3 Basic Principles of Heredity 1. Mendel 2. Monohybrid Crosses: Mendels First Law, the Law of Segregation 3. Punnett Square & Probability 4. Dihybrid Crosses: Mendels Second Law, the Law of Independent Assortment 5. Chi-square test Goodness-of-fit chi-square test When two (or more!) genes segregate independently, do we expect to see exactly the ratios predicted by rules of probability? NO !!!!!!!! Why is there deviation between an observed outcome and the expected outcome? chi-square test To Elmo chi-square test 2 steps: 1. Determine 2 value 2 = (observed-expected)2/expected 2. Use the calculation of 2 to determine a probability (p-value) Degrees of freedom (df) = one less than number of independent variables (for us, this is one less than the number of progeny classes) Consider the testcross: Rr Yy x rr yy Hypothesis: F1 progeny are expected to have 1:1:1:1 genotypic and phenotypic ratios (null hypothesis = chance alone explains differences between observed and expected results) 2 test: genotype Rr Yy Rr yy rr Yy rr yy Total observed 55 expected 51.75 (obs-exp)2/exp 0.204 51 49 52 51.75 51.75 51.75 0.011 0.146 0.001 207 207.00 0.362 = 2 Determine p-value Degrees of freedom (df) = 4 -1 = 3 df = one less than the number of progeny classes 2 > 0.05 Accept null hypothesis: chance explains the deviation of the observed from the expected < 0.05: Reject null hypothesis: something else explains the deviation of the observed from the expected Step 1: Find df = 3 Step 2: Read over to 2 = 0.362 Step 3: Read up to p-value = >0.9) 0.362 p-value > 0.9 (i.e., a deviation between observed and expected due to chance is likely, thus accept the null hypothesis How many female scientists in Chapters 2 and 3? A good Honors topic!!!!! END OF CHAPTER students 3 ISU study Marine Biology in Spain: Mediterranean Sea (summer 2010) Chapter 4: Sex determination & sex-linked characteristics 1. Mechanisms of sex determination A. Chromosomal B. Genic C. Environmental D. Human sex determination Problems (Ch 4 : Edition 4) Concept Checks: Worked Problems: Comprehension Questions Application Questions /Problems: Vocabulary for Wednesday (Sept 7) Autosome Heterogametic sex Homogametic sex Barr Body Chapter 4: Sex determination & sex-linked characteristics 1. Mechanisms of sex determination A. Chromosomal B. Genic C. Environmental D. Human sex determination Sex Determination: Definitions Sex = sexual phenotype (male, female) Male produces small gametes Female produces large gametes Sex Determination: Definitions Monoecious: both male and female reproductive structures in the same organism -- called Hermaphroditism Dioecious: either male or female reproductive structures in one organism Sex determination = mechanism by which sex is established Sex Determination: 3 Mechanisms Chromosomal Genic Environmental (To Elmo) Chapter 4: Sex determination & sex-linked characteristics 1. Mechanisms of sex determination A. Chromosomal B. Genic C. Environmental D. Human sex determination Genic Sex Determination Sex is determined by genes at one or more loci, but there are no obvious differences in the chromosomes of males and females -occurs in some plants, fungae, protozoa Environmental Sex Determination Sex is determined fully or in part by environmental factors e.g, temperature that occurs during embryonic development determines whether a turtle will be male or female (warm temps, a female; cool temps, a male), REGARDLESS of what sex chromosomes are present Environmental Sex Determination Called temperature-dependent sex determination (TSD) Hypothesis (still being tested): temp influences enzyme activity and/or controls the production of steroid hormones that act as a signal to control the expression of sex-determining genes Chapter 4: Sex determination & sex-linked characteristics 1. Mechanisms of sex determination A. Chromosomal B. Genic C. Environmental D. Human sex determination Human sex determination Male is heterogametic Female is homogametic X and Y form a homologous pair Most genes on the human X and Y are different, but X and Y form a homologous pair (and synapse at Prophase I of meiosis) because they have short regions of homology, called pseudoautosomal regions (PARs), that have the same genes Pseudoautosomal regions on X and Y What is odd about this human karyotype? Sex Determination in Humans XX-XY Turner syndrome: XO; a female -1/3000 female births -Underdeveloped sex characteristics -Sterile Is anything odd about this human karyotype? Sex Determination in Humans XX-XY Klinefelter syndrome: XXY, or XXXY, or XXXXY, or XXYY; a male - 1/1000 male births - Underdeveloped sex characteristics - Sterile Sex Determination in Humans XX-XY 00 --Lethal (embryo); spontaneously aborted Poly-X females (triplo-X syndrome): - 1/1000 female births - XXX has normal intelligence, but as increase the # of X, mental retardation appears Conclusions from cytology To Elmo END OF LECTURE, Friday Sept 2
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