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Course: CHEM 159 159, Fall 2011
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Stereochemistry 4. of Alkanes and Cycloalkanes Based on McMurrys Organic Chemistry, 6th edition, Chapter 4 2003 Ronald Kluger Department of Chemistry University of Toronto The Shapes of Molecules The three-dimensional shapes of molecules result from many forces A molecule may assume different shapes, called conformations, that are in equilibrium at room temperature (the conformational isomers are called...

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Stereochemistry 4. of Alkanes and Cycloalkanes Based on McMurrys Organic Chemistry, 6th edition, Chapter 4 2003 Ronald Kluger Department of Chemistry University of Toronto The Shapes of Molecules The three-dimensional shapes of molecules result from many forces A molecule may assume different shapes, called conformations, that are in equilibrium at room temperature (the conformational isomers are called conformers, emphasis on the first syllable) The systematic study of the shapes molecules and properties from these shapes is stereochemistry The field of stereochemistry is one of the central parts of organic chemistry and includes many important topics McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 2 4.1 Conformations of Ethane Conformers interconvert rapidly and a structure is an average of conformers Molecular models are three dimensional objects that enable us to visualize conformers Representing three dimensional conformers in two dimensions is done with standard types of drawings McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 3 Representing Conformations Sawhorse representations show molecules at an angle, showing a molecular model C-C bonds are at an angle to the edge of the page and all C-H bonds are shown Newman projections show how the C-C bond would project end-on onto the paper Bonds to front carbon are lines going to the center Bonds to rear carbon are lines going to the edge of the circle McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 4 Ethanes Conformations There barrier to rotation between conformations is small (12 kJ/ mol; 2.9 kcal/mol) The most stable conformation of ethane has all six CH bonds away from each other (staggered) The least stable conformation has all six CH bonds as close as possible (eclipsed) in a Newman projection energy due to torsional strain McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 5 4.2 Conformations of Propane Propane (C3H8) torsional barrier around the carbon carbon bonds 14 kJ/ mol Eclipsed conformer of propane has two ethane-type HH interactions and an interaction between CH and CC bond McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 6 4.3 Conformations of Butane anti conformation has two methyl groups 180 away from each other Rotation around the C2C3 gives eclipsed conformation Staggered conformation with methyl groups 60 apart is gauche conformation McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 7 4.4 Stability of Cycloalkanes: The Baeyer Strain Theory Baeyer (1885): since carbon prefers to have bond angles of approximately 109, ring sizes other than five and six may be too strained to exist Rings from 3 to 30 Cs do exist but are strained due to bond bending distortions and steric interactions McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 8 4.5 The Nature of Ring Strain Rings larger than 3 atoms are not flat Cyclic molecules can assume nonplanar conformations to minimize angle strain and torsional strain by ring-puckering Larger rings have many more possible conformations than smaller rings and are more difficult to analyze McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 9 Summary: Types of Strain Angle strain - expansion or compression of bond angles away from most stable Torsional strain - eclipsing of bonds on neighboring atoms Steric strain - repulsive interactions between nonbonded atoms in close proximity McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 10 4.6 Cyclopropane: An Orbital View 3-membered ring must have planar structure Symmetrical with CCC bond angles of 60 Requires that sp3 based bonds are bent (and weakened) All C-H bonds are eclipsed McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 11 Bent Bonds of Cyclopropane Structural analysis of cyclopropane shows that electron density of C-C bond is displaced outward from internuclear axis McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 12 4.7 Conformations of Cyclobutane and Cyclopentane Cyclobutane has less angle strain than cyclopropane but more torsional strain because of its larger number of ring hydrogens Cyclobutane is slightly bent out of plane - one carbon atom is about 25 above The bend increases angle strain but decreases torsional strain McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 13 Cyclopentane Planar cyclopentane would have no angle strain but very high torsional strain Actual conformations of cyclopentane are nonplanar, reducing torsional strain Four carbon atoms are in a plane The fifth carbon atom is above or below the plane looks like an envelope McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 14 4.8 Conformations of Cyclohexane Substituted cyclohexanes occur widely in nature The cyclohexane ring is free of angle strain and torsional strain The conformation is has alternating atoms in a common plane and tetrahedral angles between all This carbons is called a chair conformation McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 15 How to Draw Cyclohexane McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 16 4.9 Axial and Equatorial Bonds in Cyclohexane The chair conformation has two kinds of positions for substituents on the ring: axial positions and equatorial positions Chair cyclohexane has six axial hydrogens perpendicular to the ring (parallel to the ring axis) and six equatorial hydrogens near the plane of the ring McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 17 Axial and Equatorial Positions Each carbon atom in cyclohexane has one axial and one equatorial hydrogen Each face of the ring has three axial and three equatorial hydrogens in an alternating arrangement McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 18 Drawing the Axial and Equatorial Hydrogens McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 19 4.10 Conformational Mobility of Cyclohexane Chair conformations readily interconvert, resulting in the exchange of axial and equatorial positions by a ring-flip McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 20 Bromocyclohexane When bromocyclohexane ring-flips the bromines position goes from equatorial to axial and so on At room temperature the ring-flip is very fast and the structure is seen as the weighted average McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 21 4.11 Conformations of Monosubstituted Cyclohexanes The two conformers of a monosubstituted cyclohexane are not equal in energy The equatorial conformer of methyl cyclohexane is more stable than the axial by 7.6 kJ/mol McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 22 Energy and Equilibrium The relative amounts of the two conformers depend on their difference in energy E = RT ln K R is the gas constant [8.315 J/ (Kmol)], T is the Kelvin temperature, and K is the equilibrium constant between isomers McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 23 1,3-Diaxial Interactions Difference between axial and equatorial conformers is due to steric strain caused by 1,3-diaxial interactions Hydrogen atoms of the axial methyl group on C1 are too close to the axial hydrogens three carbons away on C3 and C5, resulting in 7.6 kJ/mol of steric strain McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 24 Relationship to Gauche Butane Interactions Gauche butane is less stable than anti butane by 3.8 kJ/mol because of steric interference between hydrogen atoms on the two methyl groups The four-carbon fragment of axial methylcyclohexane and gauche butane have the same steric interaction In general, equatorial positions give more stable isomer McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 25 4.12 Conformational Analysis of Disubstituted Cyclohexanes In disubstituted cyclohexanes the steric effects of both substituents must be taken into account in both conformations There are two isomers of 1,2dimethylcyclohexane. cis and trans In the cis isomer, both methyl groups same face of the ring, and compound can exist in two chair conformations Consider the sum of all interactions In cis-1,2, both conformations are equal in energy McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 26 Trans-1,2-Dimethylcyclohexane Methyl groups are on opposite faces of the ring One trans conformation has both methyl groups equatorial and only a gauche butane interaction between methyls (3.8 kJ/mol) and no 1,3diaxial interactions The ring-flipped conformation has both methyl groups axial with four 1,3-diaxial interactions Steric strain of 4 3.8 kJ/mol = 15.2 kJ/mol makes the diaxial conformation 11.4 kJ/mol less favorable than the diequatorial conformation trans-1,2-dimethylcyclohexane will exist almost exclusively (>99%) in the diequatorial conformation McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 27 4.13 Boat Cyclohexane Cyclohexane can also be in a boat conformation Less stable than chair cyclohexane due to steric and torsional strain C-2, 3, 5, 6 are in a plane H on C-1 and C-4 approach each other closely enough to produce considerable steric strain Four eclipsed H-pairs on C2, 3, 5, 6 produce torsional strain ~29 kJ/mol (7.0 kcal/mol) less stable than chair McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 28 4.14 Conformations of Polycyclic Molecules Decalin consists of two cyclohexane rings joined to share two carbon atoms (the bridgehead carbons, C1 and C6) and a common bond Two isomeric forms of decalin: trans fused or cis fused In cis-decalin hydrogen atoms at the bridgehead carbons are on the same face of the rings In trans-decalin, the bridgehead hydrogens are on opposite faces Both compounds can be represented using chair cyclohexane conformations Flips and rotations do not interconvert cis and trans McMurry Organic Chemistry 6th edition Chapter 4 (c) 2003 29
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Rutgers - CHEM 159 - 159
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7. Alkenes: Reactions and SynthesisBased on McMurrys Organic Chemistry, 6th edition 2003 Ronald Kluger Department of Chemistry University of TorontoDiverse Reactions of Alkenes Alkenes react with many electrophiles to give usefulproducts by addition (
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11. Reactions of Alkyl Halides:Nucleophilic Substitutions andEliminationsBased on McMurrys Organic Chemistry, 6thedition2003 Ronald KlugerDepartment of ChemistryUniversity of TorontoAlkyl Halides React with Nucleophilesand Bases Alkyl halides ar
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13. Structure Determination:Nuclear Magnetic ResonanceSpectroscopyBased onMcMurrys Organic Chemistry, 6th edition2003 Ronald KlugerDepartment of ChemistryUniversity of TorontoThe Use of NMR Spectroscopy Used to determine relative location of atom
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Chapter 17: Alcohols andPhenolsBased on McMurrys Organic Chemistry, 6thedition2003 Ronald KlugerDepartment of ChemistryUniversity of TorontoAlcohols and Phenols Alcohols contain an OH group connected to a a saturated C(sp3)They are important sol
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Chapter 22. CarbonylAlpha-SubstitutionReactionsBased on McMurrys Organic Chemistry, 6thedition2003 Ronald KlugerDepartment of ChemistryUniversity of TorontoThe Position The carbon next to the carbonyl group is designatedas being in the position
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Chapter 23. CarbonylCondensation ReactionsBased on McMurrys Organic Chemistry, 6thedition2003 Ronald KlugerDepartment of ChemistryUniversity of TorontoCondensation Reactions Carbonyl compounds are both the electrophile andnucleophile in carbonyl
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Chapter 24. AminesBased on McMurrys Organic Chemistry, 6thedition2003 Ronald KlugerDepartment of ChemistryUniversity of TorontoAmines Organic NitrogenCompounds Organic derivatives of ammonia, NH3, Nitrogen atom with a lone pair of electrons, maki
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CDI-g(n)X(k)01.o<n <. LfoN-f-;>is e. .~tJ.:)e.-j :2TTJL "HS Lf'I)0;.0fo(N =-5t.r2- 8(1'\) e-j lUT.~6X(o) =-n:.oi< l t) ~1:nS(n)e, 0t'\-;:~(a)ofij srr t -~OJ (jlfT"*S~.\set) of-=-t\~cS /.)\.,0._Je~k.oS).j2.ITL.
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pYO ce-d~10<" ,u.ll HOL-\ Cf)sln s'iM.J (fCLY 1D4 ~-.J :t:rr .Lt -lx (k) =- 2- S(n)eY\.Nn :.-'cfw_)nz.oa-J1E,~'n. -Xl2-) : 2:- so-)e0;0n~.!3.~(2) ~2- Scfw_n) e._J&,S'V\:/0n=-OXcfw_J.t) ~l- O'72.b~Jz- stn) e-j!f. \of0 V\.-\0
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