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07_Lecture_Outline_Bio 1107_Spring 2012

Course: BIO 1102, Spring 2012
School: UConn
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Concepts The Key structure and function of a cells overall shape and composition, as well as individual cell components, are closely related. Molecular zip codes aid material transport within a cell. The cells cytoskeleton provides a structural framework within the cell, and plays a role in cell division, movement, and transport. 2011 Pearson Education, Inc. Key Concepts Cells are highly dynamic and integrated;...

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Concepts The Key structure and function of a cells overall shape and composition, as well as individual cell components, are closely related. Molecular zip codes aid material transport within a cell. The cells cytoskeleton provides a structural framework within the cell, and plays a role in cell division, movement, and transport. 2011 Pearson Education, Inc. Key Concepts Cells are highly dynamic and integrated; within a cell, thousands of chemical reactions occur every second, molecules are constantly moving across the plasma membrane, cell products are transported along protein fibers, and elements of the cells internal skeleton grow and shrink. 2011 Pearson Education, Inc. Grouping Cells According to morphology, there are two broad groupings of life: 1. Prokaryotes, which lack a membrane-bound nucleus 2. Eukaryotes, which have such a nucleus According to phylogeny, or evolutionary history, there are three domains: 1. Bacteria prokaryotic 2. Archaea 3. Eukarya eukaryotic 2011 Pearson Education, Inc. Prokaryotic Cells Structural Overview All prokaryotes lack a membrane-bound nucleus. Recent advances in microscopy reveal complexity in prokaryotic structure. Archaeal cell structure is relatively poorly understood. Bacterial cells vary greatly in size and shape, but most bacteria contain several structural similarities: Plasma membrane A single chromosome Ribosomes, which synthesize proteins Stiff cell wall 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. Prokaryotic Cells Genetic Information Most prokaryotic species have one supercoiled circular chromosome found in the nucleoid region of the cell. The chromosome contains a long strand of DNA and a few supportive proteins. In addition to the large chromosome, many bacteria contain plasmids. Small, supercoiled, circular DNA molecules Plasmids usually contain genes that help the cell adapt to unusual environmental conditions. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. Prokaryotic Cells Internal Structure In addition to the nucleoid chromosome and plasmids, other structures are contained within the cytoplasm: All prokaryotic cells contain ribosomes, consisting of RNA molecules and protein, for protein synthesis. Many prokaryotes have internal photosynthetic membranes. Some prokaryotes have membrane-enclosed organelles. The inside of many prokaryotic cells is supported by a cytoskeleton of long, thin protein filaments. 2011 Pearson Education, Inc. Bacterial Organelles Recently, internal compartments in many bacterial species were discovered. These compartments qualify as organelles (little organs). An organelle is a membrane-bound compartment inside the cell that contains enzymes or structures specialized for a particular function. Organelles are common in eukaryotic cells. Each type of bacterial organelle is found in certain species. Bacterial organelles perform an array of tasks. 2011 Pearson Education, Inc. Prokaryotic Cells External Structure Some prokaryotes have tail-like flagella on the cell surface that spin around to move the cell. Most prokaryotes have a cell wall. Bacterial and archaeal cell walls are a tough, fibrous layer that surrounds the plasma membrane. Many species have an additional layer outside the cell wall composed of glycolipids. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. An Introduction to Eukaryotes Eukaryotes range from microscopic algae to 100-meter-tall redwood trees. Many eukaryotes are multicellular, others are unicellular. Most eukaryotic cells are larger than most prokaryotic cells. 2011 Pearson Education, Inc. Eukaryotic Cells The relatively large size of the eukaryotic cell makes it difficult for molecules to diffuse across the entire cell. This problem is partially solved by breaking up the large cell volume into several smaller membrane-bound organelles. The compartmentalization of eukaryotic cells offers two primary advantages: 1. Separation of incompatible chemical reactions 2. Increasing the efficiency of chemical reactions 2011 Pearson Education, Inc. Eukaryotes and Prokaryotes Compared Four key differences between eukaryotic and prokaryotic cells have been identified: 1. Eukaryotic chromosomes are found inside a membranebound compartment called a nucleus. 2. Eukaryotic cells are often much larger. 3. Eukaryotic cells contain extensive amounts of internal membrane. 4. Eukaryotic cells feature a diverse and dynamic cytoskeleton. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. The Nucleus The nucleus is large and highly organized. STRUCTURE: The nucleus is surrounded by a double-membrane nuclear envelope. The nucleus has a distinct region called the nucleolus. FUNCTION: Information storage and processing Contains the cells chromosomes Ribosomal RNA synthesis (in the nucleolus) 2011 Pearson Education, Inc. Rough Endoplasmic Reticulum STRUCTURE: The rough endoplasmic reticulum (rough ER, RER) is a network of membrane-bound tubes and sacs studded with ribosomes. The interior is called the lumen. The rough ER is continuous with the nuclear envelope. FUNCTION: Ribosomes associated with the rough ER synthesize proteins. New proteins are folded and processed in the rough ER lumen. 2011 Pearson Education, Inc. Golgi Apparatus STRUCTURE: The Golgi apparatus is formed by a series of stacked flat membranous sacs called cisternae. FUNCTION: The Golgi apparatus processes, sorts, and ships proteins synthesized in the rough ER. Membranous vesicles carry materials to and from the organelle. 2011 Pearson Education, Inc. Ribosomes STRUCTURE: Ribosomes are non-membranous (they are not considered organelles). Have large and small subunits, both containing RNA molecules and protein Ribosomes can be attached to the rough ER or free in the cytosol, the fluid part of the cytoplasm. FUNCTION: Protein synthesis 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. Peroxisomes STRUCTURE: Peroxisomes are globular organelles bound by a single membrane. FUNCTION: Center of oxidation reactions Specialized peroxisomes in plants called glyoxysomes are packed with enzymes that oxidize fats to form a compound that can be used to store energy for the cell. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. Lysosomes STRUCTURE: Lysosomes are single-membrane-bound structures containing approximately different 40 digestive enzymes. Lysosomes are found in animal cells. FUNCTION: Lysosomes are used for digestion and waste processing. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. How Are Materials Delivered to Lysosomes? Materials are delivered to the lysosomes by three processes: Phagocytosis Autophagy Receptor-mediated endocytosis Endocytosis is a process by which the cell membrane can pinch off a vesicle to bring outside material into the cell. In addition to phagocytosis and receptor-mediated endocytosis, a third type of endocytosis called pinocytosis brings fluid into the cell. 2011 Pearson Education, Inc. Mitochondria STRUCTURE: Mitochondria have two membranes; the inner one is folded into a series of sac-like cristae. The solution inside the cristae is called the mitochondrial matrix. Mitochondria have their own DNA and manufacture their own ribosomes. FUNCTION: ATP production is a mitochondrions core function. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. Cytoskeleton The cytoskeleton, composed of protein fibers, gives the cell shape and structural stability, and aids cell movement and transport of materials within the cell. In essence, the cytoskeleton organizes all of the organelles and other cellular structures into a cohesive whole. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. Structure and Function at the Whole-Cell Level An organelles membrane and its enzymes correlate with its function, and cell structure (e.g., the type, size, and number of organelles) correlates with cell function. Cells are dynamic living things with interacting parts and constantly moving molecules. 2011 Pearson Education, Inc. How Dynamic Are Eukaryotic Cells? Your bodys cells use, and synthesize, approximately 10 million ATP molecules per second. Cellular enzymes can catalyze >25,000 reactions per second. Each membrane phospholipid can travel the breadth of its organelle or cell in under a minute. The hundreds of trillions of mitochondria inside you are replaced about every 10 days, for as long as you live. The fluid plasma membranes composition is constantly changing. 2011 Pearson Education, Inc. The Endomembrane System The endomembrane system is composed of the smooth and rough ER and the Golgi apparatus, and is the primary system for protein and lipid synthesis. Ions, ATP, amino acids, and other small molecules diffuse randomly throughout the cell, but the movement of proteins and other large molecules is energy demanding and tightly regulated. 2011 Pearson Education, Inc. The Dynamic Cytoskeleton The cytoskeleton is a complex network of fibers that helps maintain cell shape by providing structural support. The cytoskeleton is dynamic; it changes to alter the cells shape, to transport materials in the cell, or to move the cell itself. There are three types of cytoskeletal elements: Actin filaments (microfilaments) Intermediate filaments Microtubules 2011 Pearson Education, Inc. Actin Filaments Actin filaments are the smallest cytoskeletal elements. Actin filaments form by polymerization of individual actin molecules. Actin filaments are grouped together into long bundles or dense networks that are usually found just inside the plasma membrane and help define the cells shape. 2011 Pearson Education, Inc. Actin-Myosin Interactions Actin filaments can also be involved in movement by interacting with the motor protein myosin. Actin-myosin interactions can cause cell movements such as cell crawling, cytokinesis, and cytoplasmic streaming. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. Intermediate Filaments Intermediate filaments are defined by size rather than composition. Many types of intermediate filaments exist, each consisting of a different protein. Intermediate filaments provide structural support for the cell. They are not involved in movement. Intermediate filaments form a flexible skeleton that helps shape the cell surface and hold the nucleus in place. 2011 Pearson Education, Inc. Microtubule Structure Microtubules are large, hollow tubes made of tubulin dimers (twopart compounds). Microtubules have polarity, are dynamic, and usually grow at their plus ends. Microtubules originate from the microtubule organizing center and grow outward, radiating throughout the cell. Animal cells have just one microtubule organizing center called the centrosome. Centrosomes contain two bundles of microtubules called centrioles. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. Microtubule Function Microtubules provide stability and are involved in movement; they may also provide a structural framework for organelles. Microtubules can act as railroad tracks; transport vesicles move through the cell along these microtubule tracks in an energy-dependent process. Microtubules require ATP and kinesin for vesicle transport to occur. Kinesin is a motor protein that converts chemical energy in ATP into mechanical work. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. Cilia and Flagella: Moving the Entire Cell Flagella are long, hairlike projections from the cell surface that move cells. Bacterial flagella are made of flagellin and rotate like a propeller. Eukaryotic flagella are made of microtubules and wave back and forth. Closely related to eukaryotic flagella are cilia, which are short, filament-like projections. Cells generally have just one or two flagella but may have many cilia. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. Cilia and Flagella Structure The axoneme of cilia and flagella is a complex 9 + 2 arrangement of microtubules connected by links and spokes. The axoneme attaches to the cell at a structure called the basal body. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. A Motor Protein in the Axoneme The motor protein dynein forms the arms between doublets and changes shape when ATP is hydrolyzed to walk up the microtubule. When the dynein arms on just one side of the axoneme move, cilia and flagella bend instead of elongating because the links and bridges constrain movement of the microtubule doublets. 2011 Pearson Education, Inc. 2011 Pearson Education, Inc. Chapter Summary Taken together, the data reviewed in this chapter can be summed up in six words: Cells are dynamic, highly integrated structures. 2011 Pearson Education, Inc.
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