Syllabus - Genomic and Proteomic Analysis - Fall 2007...

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Genomic and Proteomic Analysis - Fall 2007 Instructors: Schedule: Nicole Perna, ntperna@wisc.edu, 4434 Biotech Addition, Phone: 890-0171 Discussion: Tuesdays 3:30-4:20 1408 Biotech Ahna Skop, skop@wisc.edu, 2426 Biotech Addition, Phone:262-1593 Lecture: Thursdays 3:30-4:20; 1408 Biotech Jeremy Glasner, jglasner@wisc.edu, 4434 Biotech Addition Lab: Fridays 9:30-11:30; 1240 Biotech Graduate Teaching Assistants: Bryan Biehl, bsbiehl@wisc.edu, 890-0172; Michael Gilson, Bing Ma, Erkang Ai Week Date Title Staff Assignment or Reading Week 1 T Sept 4 Intro to "-omics" analysis Nicole Perna R Sept 6 Lecture: Sequencing Technologies and Applications Nicole Perna F Sept 7 Lab: NCBI Genomes Mike Gilson/Bryan Biehl Due next Thursday in class Week 2 T Sept 11 Discussion: Draft Genomes Kevin Myers Required reading and questions R Sept 13 Lecture: Sequence similarity searches and genome alignment Nicole Perna F Sept 14 Lab: Pectobacterium draft genome alignment Bryan Biehl/Bing Ma Part 1 of paper due 10/19 Week 3 T Sept 18 Discussion: Genome Alignment Fanhong Meng Required reading and questions R Sept 20 Lecture: Gene Prediction and HMMs Nicole Perna F Sept 21 Lab:
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Syllabus - Genomic and Proteomic Analysis - Fall 2007...

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