ANS_A2 - EVGGEALGRLLVV AADKTNVKAAWSK AAEKTKIRSAWAP...

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Lai Mei Kwan Michele UID: 2008078522 BSc(Bioinformatics) I BIOC1805 Assignment 2 Supplementary Answer Sheet 1a. Optimal alignment between CDAA and AEECA : -CDAA AEECA --CDAA AEEC-A --CDAA AEECA- 1b. Optimal alignment between CDAA and AEECA : 2. BLOSUM matrix from the alignment block L I A V L 0.333 I -0.861 1.189 A 0.844 -2.263 1.356 V -0.800 1.162 -2.330 1.183 3a. If the clustering threshold is 60%, the blocks will be clustered as following: A: B: PEEKSAVTALWGK GEEKAAVLALWDK EVGGEALGRLLVV
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Unformatted text preview: EVGGEALGRLLVV AADKTNVKAAWSK AAEKTKIRSAWAP EYGAEALERMFLS EYGAEALERMFLG 3b. If the clustering threshold is 30%, the blocks will be clustered as following: A: B: PEEKSAVTALWGK GEEKAAVLALWDK EVGGEALGRLLVV EVGGEALGRLLVV GEEKAAVLALWDK PADKTNVKAAWGK EVGGEALGRLLVV EYGAEALERMFLS PADKTNVKAAWGK AADKTNVKAAWSK EYGAEALERMFLS EYGAEALERMFLG AADKTNVKAAWSK AAEKTKIRSAWAP TSGVDILVKFFTS GHGQDILIRLFKS EGEWQLVLHVWAK ESQAALVKSSWEE...
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