10questions1 - BPS3101 PRACTICE QUESTIONS #1 FALL 2010...

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Unformatted text preview: BPS3101 PRACTICE QUESTIONS #1 FALL 2010 QUESTION 1 Does the sequence shown below have the potential of encoding part of a protein? 5... GCAAAGTTGTAGGGGAAGCTAAGCTCGAAATAAGGTGTGCCTATT... 3 3... CGTTTCAACATCCCCTTCGATTCGAGCTTTATTCCACACGGATAA... 5 Tip: To check your answer, you can go to Baylor College of Medicine Searchlauncher website (http://searchlauncher.bcm.tmc.edu/) and under Sequence utilities use 6 frame translation. In the box, use the format >mysequence for the name of sequence (FASTA format) and then on the next line , paste in your sequence. The ORF Finder program at the NCBI site is also a very handy program, but it needs a longer sequence and searches for the presence of an ATG (so not appropriate for this question). QUESTION 2 How many genes (approximately) would you expect a human DNA sequence of 400 kb to contain? If it were bacterial DNA (instead of human), how many genes would you expect to see and why? QUESTION 3 Suppose you have analyzed a section of the bacterial X genome and find a bidirectional promoter within the position of the box. (The region within the box contains 150 bp which are not shown). within the position of the box....
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This note was uploaded on 01/16/2011 for the course BPS 3101 taught by Professor Bonen during the Fall '09 term at University of Ottawa.

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10questions1 - BPS3101 PRACTICE QUESTIONS #1 FALL 2010...

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