lecture-13-handouts - Practical Bioinformatics for Life...

Info iconThis preview shows pages 1–3. Sign up to view the full content.

View Full Document Right Arrow Icon
10/4/2011 1 Practical Bioinformatics for Life Scientists Week 7, Lecture 13 István Albert Bioinformatics Consulting Center Penn State Recent tweets Common Fallacy Data Knowledge The more data one has the smarter they need to be! This is great for us jobs awaiting! The Mythical Man-Month a common belief is that a task completion amount of work / ( people * time ) Seminal book written in 1975 by Fredrick Brooks It is about software engineering but applies to any sufficiently complex task Conclusion the ideal team size is very small 3-5 people, above that Adding more people makes the work complete slower
Background image of page 1

Info iconThis preview has intentionally blurred sections. Sign up to view the full version.

View Full DocumentRight Arrow Icon
10/4/2011 2 A short tour of BedTools 1. modify genomics coordinates 2. find intersection between coordinates 3. merge, subtract and complement intervals 4. extract sequences that correspond to intervals the intersection is by far the algorithmically most difficult task Alter intervals slopBed/flankBed The same with an AWK program The base of every program that manipulates a GFF,
Background image of page 2
Image of page 3
This is the end of the preview. Sign up to access the rest of the document.

This note was uploaded on 02/29/2012 for the course BMMB 597D taught by Professor Istvanalbert during the Fall '11 term at Penn State.

Page1 / 4

lecture-13-handouts - Practical Bioinformatics for Life...

This preview shows document pages 1 - 3. Sign up to view the full document.

View Full Document Right Arrow Icon
Ask a homework question - tutors are online