lecture-26 - Practical Bioinformatics for Life Scientists...

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Practical Bioinformatics for Life Scientists Week 13, Lecture 26 István Albert Bioinformatics Consulting Center Penn State
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Visualizing high dimensionality data by Hadley Wickham: http://had.co.nz/ There is nothing like it in any programming environment! Parts of this presentation follow the tutorial of ggplot2
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Getting started with ggplot2 http://had.co.nz/ggplot2/book/qplot.pdf We will start out with example plots from this manual Then at the end we generate a peak distribution plot around gene starts sites.
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Install ggplot2
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diamonds.txt (data comes with ggplot2)
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NOTE For the next few slides I will be changing only line 10 (sometimes we use all data or just the small data)
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ggplot2 concepts
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This note was uploaded on 02/29/2012 for the course BMMB 597D taught by Professor Istvanalbert during the Fall '11 term at Pennsylvania State University, University Park.

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lecture-26 - Practical Bioinformatics for Life Scientists...

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