Stereoisomers have the same connectivity, but differ in the arrangement of their atoms in space. Therefore, using only the IUPAC naming system will produce the same name for a pair of stereoisomers. It is problematic for two reasons:
- Each molecule should have its own distinct name.
- A chemist who understands the naming system should be able to produce a structure for the molecule based solely upon the name.
Using the Cahn-Ingold-Prelog system (or R,S-system), named for organic chemists Robert Sidney Cahn, Christopher Kelk Ingold, and Vladimir Prelog, in addition to the IUPAC system solves these problems. The Cahn-Ingold-Prelog system (or CIP) is a system of nomenclature used with the IUPAC system to identify enantiomeric structures by name alone. The rules for the Cahn-Ingold-Prelog system are:
- Each of the four groups attached to a chirality center is assigned a priority (1 to 4). A chirality center (or stereogenic center or chiral center) is a single tetrahedral atom with four different groups.
- Priority is first assigned based on the atomic number of the atom that is directly attached to the chirality center.
- The group with the lowest atomic number is given the lowest priority (4).
- The group with the next higher atomic number is given the next higher priority (3), and so on.
- When a priority cannot be assigned based on the atomic number of the atoms that are directly attached to the chirality center, the next set of atoms in the unassigned groups are examined, and priority is assigned at the first point of difference.
- After prioritization, the formula can be rearranged (rotated) so that the group with the lowest priority is directed away from the viewer and a path is traced from priority atom one to priority atom two to priority atom three.
- If the path goes in a clockwise direction, the enantiomer is designated R (based on the Latin word rectus, which means "right-handed").
- If it goes in a counterclockwise direction, the enantiomer is designated S (based on the Latin word sinister, which means "left-handed").
- If there is more than one chiral center, the location must be included inside of parenthesis, for example, (2R,3S).