BIOC 300a

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3 pages
- practice MT BIOC300A
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC 300A Fall 2015 Practice Exam 2 INSTRUCTOR: Dr. D. Briant COMPLETE THIS EXAM AT HOME. WEDNESDAYS LECTURE (NOV. 18) WILL BE DEDICATED TO REVIEWING THE EXAM 30 MARKS TOTAL 1 HOUR 1. Economy class syndrome was a name given to a condition where people on
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practice MT BIOC300A
19 pages
- BIOC300A Lecture #15
- University of Victoria
- BIOC 300a - Fall 2015
- 16#10#17& However, NO aspartate here Similar to serine protease, except S-H rather than O-H Cysteine pKa ~8 Serine pKa ~13 Serine H is a better electrophile, doesnt need help from aspartate 1& 16#10#17& Pair&of&Asp&residues& Ac5vate&water& molecule& Asp
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BIOC300A Lecture #15
84 pages
- Bioc300A Lecture #18:19
- University of Victoria
- BIOC 300a - Fall 2015
- Biochemistry 300A, Fall 2016 Carbohydrates chapter 11 in textbook Two lectures: Monica Palcic Advanced topic -biological roles of carbohydrates Glycobiology 1988- Prof. Dwek (Oxford) - focus on diversity, review nomenclature classical and non-classical ro
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Bioc300A Lecture #18:19
13 pages
- BIOC300A Lecture #21
- University of Victoria
- BIOC 300a - Fall 2015
- 16#11#07& Pgs: 367-376, 378-382 Q: 1, 2, 10, 12, 18 Conferred&by&two&classes&of&membrane& proteins:& Pumps& Use&source&of&free&energy&to&drive&process& [email protected]&transport& Channels& Passive - down gradient Enable&molecules&to&ow&in&thermodynamically&do
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BIOC300A Lecture #21
12 pages
- BIOC300A Drug 2
- University of Victoria
- BIOC 300a - Fall 2015
- 16#11#22% 1. May%modulate%target%too%eec5vely% An5coagulant0rugs% 2. May%modulate%related%targets% May modulate related targets Members%of%theame%protein0amily% May An5viral%protease%inhibitors% modulate proteins unrelated to target - hERG channel 3. %M
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BIOC300A Drug 2
1 pages
- BIOC300B S16 practice exam answers
- University of Victoria
- BIOC 300a - Fall 2015
- 1. shuffle and realign 2. related to the absolute configuration of glyceraldehyde, not necessarily related to rotation of light 3. this should read delta carbon, not gamma. 4. benzene, t-butanol, water. Increased hydrogen bonding increases the boiling poi
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BIOC300B S16 practice exam answers
2 pages
- 6f additional topic 6 slides BIOC300A S16
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC300A Summer2015 WhyisKM soimportanttounderstand enzymes? KM: Rangebetween101 and107 formostenzymes []atwhichhalfactivesitesarefilled Providesmeasureofhow[S]reqd forcatalysis Iftheforwardrxn isfavoured (ES>E+P) HighKM =weakbinding LowKM =strongb
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6f additional topic 6 slides BIOC300A S16
2 pages
- BIOC300B S16 practice exam TO POST
- University of Victoria
- BIOC 300a - Fall 2015
- Name: 1. Describe how one confirms whether or not a particular sequence alignment is significant (2 marks) 2. We use D and L designations for amino acid stereochemistry and not R and S? What are these designations based upon and why are they used? (3 mark
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BIOC300B S16 practice exam TO POST
3 pages
- BIOC300A S16 syllabus to post
- University of Victoria
- BIOC 300a - Fall 2015
- BIOCHEMISTRY300AA01GENERALBIOCHEMISTRYI COURSEOUTLINESummer2016 CRN31132 TimeandPlace(theseswitch,soreadcarefully): Monday8:3010:20,DavidTurpinA102 TuesdayandFriday10:3012:20,DavidTurpinA120 Textbook: BiochemistrybyBerg,Tymoczko,andStryer,8thedition Instr
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BIOC300A S16 syllabus to post
18 pages
- 3 Prot Charact student BIOC300A S16
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC300A Summer2016 Biochemistry300A summer2016 topic3 proteincharacterization chapter 3 in textbook chapter3intextbook assigned reading section 3.1, 3.3, 3.5 CHAPTER PROBLEMS 1, 2, 3, 6, 9, 11, 16, 17, 20, 21, 22, 23, 27 Topic3:proteincharacterization 1
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3 Prot Charact student BIOC300A S16
13 pages
- 1 biochem basics student BIOC300A S16
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC300A Summer2016 Biochemistry300A summer2016 topic1 introduction/biochemistrybasics assigned reading section 1.1, 1.3 CHAPTER PROBLEMS 1, 3, 4, 6, 7, 10, 12, 13 Topic1:BiochemistryBasics 1 BIOC300A Summer2016 Grading and Important dates: BIOC300Aoutli
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1 biochem basics student BIOC300A S16
13 pages
- 4 bioinformatics student BIOC300A S16
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC300A Summer2016 Biochemistry300A summer2016 topic4 bioinformatics chapter 6 in textbook chapter6intextbook topic 4 (Ch.6) assigned reading 169 184 CHAPTER PROBLEMS 1, 2, 3, 6, 7, 9, 15 Topic4:bioinformatics 1 Three-dimensional structures have been de
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4 bioinformatics student BIOC300A S16
34 pages
- 2 Proteins student BIOC300A S16
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC300A Summer2016 Biochemistry300A summer2016 topic2 proteincompositionandstructure chapter 2 in textbook chapter2intextbook assigned reading all sections of the chapter are required CHAPTER PROBLEMS all of the chapter problems are suitable Topic2:prote
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2 Proteins student BIOC300A S16
38 pages
- 6 enzymes student BIOC300A S16
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC300A Summer2016 Biochemistry300A summer2016 topic6 basicenzymeconceptsand kinetics chapter8intextbook Topic 6: assigned reading section 8.1 introduction to enzymes section 8 8.2 2 8.3 83 free energy, active sites, enzyme-substrate complex section
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6 enzymes student BIOC300A S16
17 pages
- BIOC300A Lecture #20
- University of Victoria
- BIOC 300a - Fall 2015
- 16#11#03& Ch&11& Pgs:&315#336& Ques1ons:& 2,&9,&12,&19,&20,&22,&23,&24,&25,&33,& 1& 16#11#03& One&of&the&4&major&classes&of&biological& macromolecules& Abundant& Energy&store/fuel& DNA/RNA& Cell&walls&of&plants/bacteria& Modica1on&of&proteins& Mono
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BIOC300A Lecture #20
13 pages
- BIOC300A Lecture #17
- University of Victoria
- BIOC 300a - Fall 2015
- 16#10#25' 1' 16#10#25' Structurally'and'chemically'diverse' Principal'forms'of'stored'energy' Major'structural'elements'of'biological' membranes' To'a'lesser'degree:' Enzyme'cofactors,'anchor'proteins'to'membranes,' emulsifying'agents,'hormones'etc'
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BIOC300A Lecture #17
17 pages
- BIOC300A Lecture #16
- University of Victoria
- BIOC 300a - Fall 2015
- MIDTERM 2: Chp 8 215-241 Chp 9 251-275 Chp 10 285-292 (10.11) 16#10#17& Allosteric&control& Isozymes& Reversible&covalent&modica;on& Proteoly;c&ac;va;on& Controlling&amount&of&E&present& 1& 16#10#17& Dis;nct&regulatory&sites& Small&molecules& Mul;p
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BIOC300A Lecture #16
4 pages
- BCMB301A_Lab_Manual_Supplemental_-_Amino_Acid_Structures_and_pKa_Values (1)
- University of Victoria
- BIOC 300a - Fall 2015
- Amino Acid Structures and pKa Values Structures (fully protonated) H3N pK (-COOH) pka * pK (-NH3+) pK (R group) + 2.34 9.60 NA 2.34 9.69 NA 2.36 9.68 NA 2.36 9.60 NA 2.28 9.21 NA 1.99 10.96 NA Glycine H3N + Alanine H3N + Isoleucine H3N + Leucine H3N + Met
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BCMB301A_Lab_Manual_Supplemental_-_Amino_Acid_Structures_and_pKa_Values (1)
12 pages
- B300A L1
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC300A Fall 2015 Biochemistry 300A fall 2015 topic 1 catalytic strategies chapter 9 in textbook Catalytic Strategies Topic 1: Catalytic Strategies 1 BIOC300A Fall 2015 Creative catalytic strategies Serine proteases: p Promote a rxn that is extremely s
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B300A L1
3 pages
- practice MT BIOC300A F15 to post
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC 300A Fall 2015 Practice Exam 2 INSTRUCTOR: Dr. D. Briant COMPLETE THIS EXAM AT HOME. WEDNESDAYS LECTURE (NOV. 18) WILL BE DEDICATED TO REVIEWING THE EXAM 30 MARKS TOTAL 1 HOUR 1. Economy class syndrome was a name given to a condition where people on
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practice MT BIOC300A F15 to post
18 pages
- 1b cat strat RE student B300A F15
- University of Victoria
- BIOC 300a - Fall 2015
- carb anhydrase - incredibly fast chymotrypsin - cool acid base chemistry BIOC300A Fall2015 Biochemistry300A fall2015 topic1 catalyticstrategies chapter 9 in textbook chapter9intextbook 1b:Restrictionenzymes pp.269 275 questionsfrom textbook:6,7,8,13 b k
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1b cat strat RE student B300A F15
12 pages
- 1a cat strat CA student B300A F15
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC300A Fall2015 Biochemistry300A fall2015 topic1 catalyticstrategies chapter 9 in textbook chapter9intextbook CatalyticStrategies Topic1:CatalyticStrategies 1 BIOC300A Fall2015 Creativecatalyticstrategies Serineproteases: p Promotearxnthatisextremelys
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1a cat strat CA student B300A F15
36 pages
- 3 carbs student BIOC300A F15
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC300A Fall2015 Biochemistry300A fall2015 topic3 carbohydrates chapter 11 in textbook chapter11intextbook BIOC300Aoutline protein structure characterization bioinformatics hemoglobin enzymes bond types water acid/base amino acids thermodynamics kinetics
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3 carbs student BIOC300A F15
8 pages
- 1c cat strat NMP kin student B300A F15
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC300A Fall2015 1c:catalyticstrategies nucleosidemonophosphate kinase thistopicisnotcoveredinthetextbook g exammaterialbasedonlecturecoverage NMPkinases Catalyzetransferofterminalphosphorylfrom NTPtophosphorylgrpofNMP can swap phosphoryl groups betwee
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1c cat strat NMP kin student B300A F15
42 pages
- 2 reg strats student B300A F15
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC300A Fall2015 Biochemistry300A fall2015 topic2 regulatorystrategies chapter 10 in textbook chapter10intextbook topic 2 (Ch.10) assigned reading 285 286 introduction to enzyme regulatory strategies 286 292 allosteric ll i regulation l i and d aspar
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2 reg strats student B300A F15
75 pages
- Biochem 300A Fall 2015 Palcic Carbohydrates 2 lectures Advanced Topic
- University of Victoria
- BIOC 300a - Fall 2015
- Biochemistry 300A, Fall 2015 Carbohydrates chapter 11 in textbook Two lectures: Monica Palcic Advanced topic -biological roles of carbohydrates Glycobiology 1988- Prof. Dwek (Oxford) -focus on diversity, review nomenclature classical and non-classical rol
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Biochem 300A Fall 2015 Palcic Carbohydrates 2 lectures Advanced Topic
21 pages
- 5 channels student B300A F15
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC300A Fall2015 Biochemistry300A fall2015 Topic5 membranechannelsandpumps chapter13intext topic 5 (Ch.13) assigned reading 367 377 introduction to membrane channels and pumps families of ATP hydrolyzing pumps carriers i 378 389 ion channels volt
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5 channels student B300A F15
24 pages
- 4 lipids student BIOC300A F15
- University of Victoria
- BIOC 300a - Fall 2015
- BIOC300A Fall2015 Biochemistry300A fall2015 topic4 lipidsandmembranes chapter 12 in textbook chapter12intextbook topic 4 (Ch.12) assigned reading you will need to read the entire chapter for this section, except the section on lipid rafts (pg 358) and eu
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4 lipids student BIOC300A F15
8 pages
- BIOC300A Drug 3
- University of Victoria
- BIOC 300a - Fall 2015
- Hemagglu(nin 18 subtypes H1 through H18 Helps with initial binding to cell Neuraminidase 11 subtypes N1 through N11 Helps release replicated flu virus from host cell An(genic type (A,B,C) The host of origin Geographical origin Strain number
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BIOC300A Drug 3
19 pages
- BIOC300A Drug 1
- University of Victoria
- BIOC 300a - Fall 2015
- 16#11#22% Pages%and%Ques/ons% Ch%36% Pages%1033#1055% Ques/ons:%4,7,%8% 1% 16#11#22% Year 1 often take 15-20 years to come Year%1%iden/fy0isease%and%ini/ate%cmpd% % earch% 1-2 - Confirm potency in animal model Years Years%1#2%Conrm%potency%in%animal%
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BIOC300A Drug 1