Homework 1 - Association Statistics
CS/HG 124/224
Due. April 18, 2014, 8 pm
Exercise 1. Association Study at a Single SNP
Part A. Calculating the Non-Centrality Parameter
Use the formulas described in Lectures 2 & 3 to compute the non-centrality parameter
Homework 0B - R Genetics Sample Session
CS/HG 124/224
Due: April 7th , 2015, 8 pm at Math Sci. Bld 2933
Problem 1
Suppose you toss a fair coin 20 times. Let A be the event that at least one coin toss comes up heads. What is the probability that A occurs?
Homework 0A - Introduction to R through a Sample Session
CS/HG 124/224
Submission not required
The following session is intended to introduce to you some features of the R environment by using them. Many
features of the system will be unfamiliar and puzzl
Computational Genetics
Spring 2015
Lecture 2
Eleazar Eskin
University of California, Los Angeles
Association Statistcs
and Power
+ Indirect Association
Lecture 2.
April 1st, 2015
Announcements
n
2 Questions due on web-forum tonight
1 on Eric Lander video
Computational Genetics
Spring 2015
Lecture 1
Eleazar Eskin
University of California, Los Angeles
Introduction to
Computational Genetics
+ Association Studies
Lecture 1.
March 30th, 2015
Course Requirements
n
Prerequisites
n
Requirements
n
Knowledge of a p
An Introduction to R
Notes on R: A Programming Environment for Data Analysis and Graphics
Version 3.1.3 (2015-03-09)
W. N. Venables, D. M. Smith
and the R Core Team
This manual
Copyright c
Copyright c
Copyright c
Copyright c
Copyright c
is for R, version
doi: 10.1111/j.1469-1809.2008.00469.x
Efcient Association Study Design Via Power-Optimized
Tag SNP Selection
B. Han1 , H. M. Kang1 , M. S. Seo2 , N. Zaitlen3 and E. Eskin4,
1
Department of Computer Science and Engineering, University of California, San D