Name:
Seating Number (not UID #):
BE 100: BIOENGINEERING FUNDAMENTALS
FALL 2017
Midterm 1
October 31, 2017
1. (19 points) Optical tweezer experiments are performed on single DNA molecules
whereby a te
Name:
Seating (not UID) Number:
BE 100: BIOENGINEERING FUNDAMENTALS
FALL 2017
Quiz
October 12, 2017
1. (12 points) You have an aqueous solution in a test tube containing the peptide MKD.
Note that M i
BE 100. BIOENGINEERING FUNDAMENTALS
SPRING 2017
Additional Problems before Exam 1
Not to be Turned In
1. You are working in a drug delivery company, and your job involves loading a particular
anticanc
BE 100. BIOENGINEERING FUNDAMENTALS
SPRING 2017
Additional Problems before Exam 2
Not to be Turned In
1. You are working in a biotechnology company trying to deliver a small molecule drug to
cancer ce
BE 110:
Bioreactors (cont.)
Lecture #8
Biotransport and Bioreaction Processes
Prof. Daniel T. Kamei
3
Kinetics of receptor/ligand binding
Bioreactors (cont.)
Outline
Prof. Daniel T. Kamei
Rearrange
Re
BE 110:
Receptor/Ligand Binding (cont.)
Lecture #9
Biotransport and Bioreaction Processes
Prof. Daniel T. Kamei
3
Kinetics of receptor/ligand trafficking
Kinetics of receptor/ligand binding (cont.)
Ou
BE 110:
Biotransport and Bioreaction Processes
Lecture #3
Example: Drug Delivery (continued)
Example 6.8 in Truskey et al.
A porous sphere of radius R contains a drug to treat a
particular disease. Th
BE 110:
Lecture #2
Biotransport and Bioreaction Processes
(x0-l,y0,z0)
(x0,y0+l,z0)
x, y, and z directions.
Molecules move at speed u in each of the
Lattice spacing is l (distance of one jump).
any on
BE 110:
Lecture #4
Biotransport and Bioreaction Processes
Need to incorporate convection and/or reduce the length scale.
See that a protein or virus diffusing only 1 cm can take an
extremely long time
BE 110:
Biotransport and Bioreaction Processes
Lecture #5
Combining Reaction Kinetics and Diffusion
Prof. Daniel T. Kamei
3
Diffusion and reaction in porous media
Damkhler number in diffusion and reac
BE 110:
Biotransport and Bioreaction Processes
Lecture #6
Diffusion and reaction in porous media (cont.)
Prof. Daniel T. Kamei
3
Material related to Exam #1
Point regarding ODEs that can be solved ana
BE 110:
Biotransport and Bioreaction Processes
Lecture #10
Receptor/Ligand Trafficking (cont.)
Prof. Daniel T. Kamei
3
Kinetics of receptor/ligand trafficking (cont.)
Outline
A few signaling concepts
BE 110:
Reaction Kinetics
Bioreactors
Will now move to
Tanks
Convection
3
Mass Action Kinetics
Biotransport and Bioreaction Processes
Lecture #7
Current State of the Course
Diffusion
1D Steady-State
P
Name:
Number:
BE 100: BIOENGINEERING FUNDAMENTALS
WINTER 2017
Exam 2
February 28, 2017
1. Consider a gas that can be described by the following Redlich-Kwong equation of state
/
where P is the press
BE 100. BIOENGINEERING FUNDAMENTALS
WINTER 2017
PROBLEM SET 2
Due January 26, 2017 (Thursday)
1. According to BLAST, what are the names of the ten proteins that are most homologous to
bovine serum alb
BE 100. BIOENGINEERING FUNDAMENTALS
WINTER 2017
PROBLEM SET 6
Due February 23, 2017 (Thursday)
1. You have an aqueous solution containing a protein of interest, sodium chloride (which
dissociates comp
BE 100. BIOENGINEERING FUNDAMENTALS
WINTER 2017
PROBLEM SET 8
Due March 9, 2017
1. Consider an aqueous solution containing two types of polypeptides (A and B). The
following self-assembly reaction occ
BE 100. BIOENGINEERING FUNDAMENTALS
WINTER 2017
PROBLEM SET 5
Due February 16, 2017 (Thursday)
1. Short answers
a. At constant U, V, and n, which state function do you minimize or maximize?
b. What is
BE 100. BIOENGINEERING FUNDAMENTALS
WINTER 2017
Additional Problems before Exam 2
Not to be Turned In
1. One particular charged polymer (polymer i) is added to the left-hand side compartment of
a diff
BE 100. BIOENGINEERING FUNDAMENTALS
WINTER 2017
PROBLEM SET 1
Due January 19, 2017 (Thursday)
1. Estimate the pI of the peptide Asp-His-Glu-Lys-Arg-Thr. Asp is considered the first
residue, since it h
BE 100. BIOENGINEERING FUNDAMENTALS
WINTER 2017
PROBLEM SET 7
Due March 2, 2017
1. You are analyzing a nonionic surfactant that has a hydrophilic head that strongly
hydrogen bonds with water. Do you e
BE 100. BIOENGINEERING FUNDAMENTALS
WINTER 2017
Additional Office Hour Problems for Week 8
1. You are working in the drug delivery division in a pharmaceutical company. You are
studying the delivery o
BE 100. BIOENGINEERING FUNDAMENTALS
WINTER 2017
Additional Office Hour Problems for Week 7
1. A single-phase solution containing polyethylene glycol (a polymer) and water can phase
separate into two l
BE 100. BIOENGINEERING FUNDAMENTALS
WINTER 2017
Additional Office Hour Problems for Week 9
1. Is the surface tension of water greater than, less than, or equal to the interfacial tension
between oil a
BE 100. BIOENGINEERING FUNDAMENTALS
WINTER 2017
Additional Office Hour Problems for Week 6
1. Derive an expression for the partial molar volume of component 1 given the following
expression for the mo
BE 100. BIOENGINEERING FUNDAMENTALS
Winter 2017
Additional Office Hour Problems for Week 10
1. Consider the model developed by Linus Pauling for hemoglobin binding to
oxygen. The energy level represen
NAME:
Introduction to Tissue Engineering (140 pts total)
Final Exam Spring 2015
This exam must be turned in no later than 3:00 pm on Friday, March 20, 2015, to
Professor Kaskos Office in room 4121K En
Jeopardy Answers
General
1) Name 2 tissues that can regenerate spontaneously, and two that cannot.
Regenerative Tissues
Epithelial
Connective
Poorly- or Non-Regenerative Tissues
Nervous
Muscle
2)